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    srj-19 Serpentine Receptor, class J [ Caenorhabditis elegans ]

    Gene ID: 191939, updated on 7-Sep-2023

    Summary

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    Gene symbol
    srj-19
    Gene description
    Serpentine Receptor, class J
    Primary source
    WormBase:WBGene00005607
    Locus tag
    CELE_Y45G12C.14
    See related
    AllianceGenome:WB:WBGene00005607
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    See srj-19 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    8
    Sequence:
    Chromosome: V; NC_003283.11 (2568876..2570743, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene GST C-terminal domain-containing protein;Glutathione S-transferase P 10 Neighboring gene Nucleotid_trans domain-containing protein Neighboring gene ncRNA Neighboring gene Serpentine Receptor, class J Neighboring gene Nuclear receptor domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Updating the str and srj (stl) families of chemoreceptors in Caenorhabditis nematodes reveals frequent gene movement within and between chromosomes. Robertson HM. Chem Senses, 2001 Feb. PMID 11238245
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class J
    NP_503703.1
    • Partially confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      2568876..2570743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_071302.1 → NP_503703.1  Serpentine Receptor, class J [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_503703.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N4X6
      Conserved Domains (1) summary
      pfam10319
      Location:1 → 292
      7TM_GPCR_Srj; Serpentine type 7TM GPCR chemoreceptor Srj
    Nucleotide Protein
    Heading Accession and Version

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