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    LOC101927609 uncharacterized LOC101927609 [ Homo sapiens (human) ]

    Gene ID: 101927609, updated on 10-Oct-2023

    Summary

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    Gene symbol
    LOC101927609
    Gene description
    uncharacterized LOC101927609
    See related
    Ensembl:ENSG00000237773
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    Location:
    7p21.1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (17134912..17299320, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (17264594..17428891, complement)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124901595 Neighboring gene bromodomain and WD repeat domain containing 1 pseudogene 3 Neighboring gene uncharacterized LOC124901596 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 7:17134708 Neighboring gene uncharacterized LOC107986772 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25671 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25672 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:17273731-17274930 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17983 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17984 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17985 Neighboring gene aryl hydrocarbon receptor Neighboring gene uncharacterized LOC105375171 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:17411084-17412283 Neighboring gene long intergenic non-protein coding RNA 2888 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:17445039-17446238 Neighboring gene uncharacterized LOC105375172

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Clone Names

    • AC003075.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      17134912..17299320 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007060234.1 RNA Sequence

    2. XR_007060235.1 RNA Sequence

    3. XR_007060232.1 RNA Sequence

      Related
      ENST00000419382.6

    4. XR_007060231.1 RNA Sequence

    5. XR_007060236.1 RNA Sequence

    6. XR_007060230.1 RNA Sequence

    7. XR_007060233.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      17264594..17428891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007078286.1 RNA Sequence

    2. XR_007078288.1 RNA Sequence

    3. XR_007078287.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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