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    TMEM191A transmembrane protein 191A (pseudogene) [ Homo sapiens (human) ]

    Gene ID: 84222, updated on 10-Oct-2023

    Summary

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    Official Symbol
    TMEM191Aprovided by HGNC
    Official Full Name
    transmembrane protein 191A (pseudogene)provided by HGNC
    Primary source
    HGNC:HGNC:25317
    See related
    Ensembl:ENSG00000291085 AllianceGenome:HGNC:25317
    Gene type
    pseudo
    RefSeq status
    PREDICTED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    TMEM191AP
    Summary
    Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in testis (RPKM 14.2), spleen (RPKM 1.0) and 1 other tissue See more
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    Genomic context

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    Location:
    22q11.21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (20701114..20704603)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (21109823..21113312)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (21055402..21058891)

    Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985584 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:21051020-21051636 Neighboring gene POM121 transmembrane nucleoporin like 4, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13497 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18683 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:21057515-21058087 Neighboring gene BCR pseudogene 5 Neighboring gene phosphatidylinositol 4-kinase alpha Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:21089235-21089736 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13499 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18685 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18684 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18686 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18687 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:21105755-21106552 Neighboring gene Sharpr-MPRA regulatory region 10582 Neighboring gene serpin family D member 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13500 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:21213217-21214026 Neighboring gene Sharpr-MPRA regulatory region 10319 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:21227050-21227239 Neighboring gene synaptosome associated protein 29 Neighboring gene MPRA-validated peak4460 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:21240059-21240559

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    Related articles in PubMed

    1. A genome annotation-driven approach to cloning the human ORFeome. Collins JE, et al. Genome Biol, 2004. PMID 15461802, Free PMC Article
    2. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995
    3. Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs. Wiemann S, et al. Genome Res, 2001 Mar. PMID 11230166, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    Pathways from PubChem

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    General gene information

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    Markers

    Clone Names

    • MGC161601, MGC161603, DKFZp434N035, DKFZp434G1017

    Gene Ontology Provided by GOA

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_026815.1 RNA Sequence

      Status: PREDICTED

      Source sequence(s)
      AL136879
      Related
      ENST00000450925.6

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

      Range
      20701114..20704603
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060946.1 Alternate T2T-CHM13v2.0

      Range
      21109823..21113312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_032262.1: Suppressed sequence

      Description
      NM_032262.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9H0A3.1 GenPept UniProtKB/Swiss-Prot:Q9H0A3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
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