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    RNVU1-7 RNA, variant U1 small nuclear 7 [ Homo sapiens (human) ]

    Gene ID: 26864, updated on 10-Oct-2023

    Summary

    Official Symbol
    RNVU1-7provided by HGNC
    Official Full Name
    RNA, variant U1 small nuclear 7provided by HGNC
    Primary source
    HGNC:HGNC:37500
    See related
    Ensembl:ENSG00000206585 AllianceGenome:HGNC:37500
    Gene type
    snRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    vU1.7; vU1.9; RNU1-6; RNU1-9; RNU1-6P; RNU1-9P; RNVU1-9; RNU1-26P
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    Genomic context

    Location:
    1q21.2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (148038753..148038916, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (146768502..146768665)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (147511004..147511167, complement)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 89B Neighboring gene PDZ domain containing 1 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:145944387-145945098 Neighboring gene RNA, U1 small nuclear 129, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:145963909-145964683 Neighboring gene tRNA-Gln (anticodon CTG) 3-2 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:147510508-147511043 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:147511044-147511580 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:145969873-145970414 Neighboring gene OCT4 hESC enhancer GRCh37_chr1:147520877-147521378 Neighboring gene tRNA-Asn (anticodon GTT) 9-2 Neighboring gene PDE4DIP pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:147532116-147532616 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:147532617-147533117 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:146009957-146010457

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Other Names

    • RNA, U1 small nuclear 26, pseudogene
    • RNA, U1 small nuclear 6, pseudogene
    • RNA, U1 small nuclear 9, pseudogene
    • RNA, variant U1 small nuclear 9

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables pre-mRNA 5'-splice site binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mRNA 5'-splice site recognition IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of U1 snRNP IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_004426.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC239803
      Related
      ENST00000383858.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      148038753..148038916 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_025791756.1 Reference GRCh38.p14 PATCHES

      Range
      700520..700683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      146768502..146768665
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)