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    AT2G31820 Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817739, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT2G31820
    Gene description
    Ankyrin repeat family protein
    Primary source
    Araport:AT2G31820
    Locus tag
    AT2G31820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20M17.14; F20M17_14
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    Genomic context

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    See AT2G31820 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (13529766..13533348)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene Integrin-linked protein kinase family Neighboring gene ACT domain-containing small subunit of acetolactate synthase protein Neighboring gene endonuclease/exonuclease/phosphatase family protein Neighboring gene Thioredoxin superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_128740.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Ankyrin repeat family protein
    NP_180741.1
    • Ankyrin repeat family protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT1G05640.1); Has 69909 Blast hits to 28585 proteins in 1153 species: Archae - 97; Bacteria - 6878; Metazoa - 33005; Fungi - 7349; Plants - 5597; Viruses - 621; Other Eukaryotes - 16362 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13529766..13533348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128740.2 → NP_180741.1  Ankyrin repeat family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180741.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VYC8, A0A7G2EAK0, Q9SKB8
      Conserved Domains (4) summary
      PHA02736
      Location:360 → 418
      PHA02736; Viral ankyrin protein; Provisional
      sd00045
      Location:291 → 323
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:228 → 321
      Ank_2; Ankyrin repeats (3 copies)
      pfam13962
      Location:473 → 585
      PGG; Domain of unknown function
    Nucleotide Protein
    Heading Accession and Version

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