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Submitted SNP(ss) Details: ss107938303           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_49_chr1_802614
RefSNP(rs#)rs4246500
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:86

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss107938303|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 AGGGCCCTTC TGCACACTGG GGTCTGAGTA GTTGCACTCT GGTGCATCCA TAGGTGTTCC
 CCACCTGGAG CACAGCTGTG GATAGAAGCC GGGAGAGCTG TGGAGGGAAG AGGAGGAGGA
 GGGAGTCTCG GGGCAGCCCC AGCTGCCAGG CAGGGCCTCT GCAAGTGAGA TGCAGATCCA
 GCCTGTTGGC CACTTAGCAC
 Y
 TGCTTGGCCG CCTGCAGATC ACCTGACCTC TGCTCACCTG TAAATGGGGG TTGCAGCAGC
 ACTTACCTTC TGGGACTCCT GCAGCTTGAA GGGGCAGCAC ACACCACATG CTGAGAAGGC
 GCCTAACTCA GGCAAGCTTC TCCAACAGCA CCACATCAGA TTAACATCCA ACCTGTACAG
 GACATCAAAT CTCCCCATCC

  Submitted Frequency for ss107938303 back to top
There is no frequency submission for ss107938303.


  dbSNP summary of Genotypes for ss107938303 back to top
No sufficient data to compute Hardy-weinberg probability for ss107938303.


  Submitted individual genotype for ss107938303 back to top
There is no individual genotype data for ss107938303.