| Submitter | | Handle | SC_SNP | | Submitter SNP ID | NT_007299.12_10533930 | | RefSNP(rs#) | rs558340 | | Submitted Batch ID | CHR6_NA11321 | | Submitted Date | Oct 21, 2003 | | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases | | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_007299
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | N.D |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | CHR6_NA11321 | | Ascertainment Samplesize | 2 | | Population | N.D. |
| | Allele | | Observed Allele | A/G | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c_g/a |
| | | Variation | | Frequency Submission | N.D. | | Genotype Summary | N.D. | | Genotype Submission | N.D. | | Haplotype | N.D. |
|
| Comment | | sequence:S6A_2-517a02.p1kposition:683quality:37 |
>gnl|dbSNP|ss12779098|allelePos=287|len=1758|taxid=9606|alleles='A/G'|mol=Genomic AACTGTTCAC AGTGGTCGTT CTTTTTCTTC AATTCAATTT TAAGCAATTT GAGGAATGAG
GCTAAAGATC ATTTTTCTTT TTTTTTCGAT TTTCCTTTCT Tttttttaat tattattata
ctttaagttt tagggtacat gtgcacaatc tgcaggttag ttacatatgt atacatgtgc
catgctggtg tgctgcaccc attaactcgt catttagcat taggtgtatc tcctaatgct
atccctcccc cctcccccca ccccaaaaca gtccccagag tgtgac
R
ttacccttcc tgtgtccatg tgttctcatt gttcaattcc cacctctgag tgagaacatg
aggtgtttgg ttttttgtcc ttgtgatagt ttactgagaa tgatgatttc ccatttcatc
catgtcccta caaaggacat gaactcatca ttttttatgg ctgcatagta ttccatggtg
tatatgtgcc acattttctt aatccagtct atcattgttg gacatttggg ttggctccaa
gtctttgcta ttgtgaatag tgccgcaata aacatatatg tgcatgtgtc tttatagcag
catgatttat agtcctttgg gtatataccc agtaatggga tggctgggtc aaatggtatt
tctagttcta gatccctgag gaatcgccac actgacttcc acaatggttg aagtagttta
cagtcccacc aacagtgtaa aagtgttcct atttctccac atcctctcca gcacctgttg
tttcctgact ttttaatgat tgccattcta actggtgtga gatggtatct cattgtggtt
ttgatttgca tttctctgat ggtcagtgat ggtgagcatt ttttcatgtg tcttttggct
gcataaatgt cttcttttga gaagtgtctg ttcatatcct ttgcccactt tttgatgggg
ttgtttgttt ttttcttgta aatttgtttg agttctttgt agattctgga tattagccct
ttgtcagatg agtaggttgt gaaaattttc tcccattctg taggttgcct gttcactctg
atggtagttt cttttgctgt gcagaagctc tttagtttaa ttagatccca tttgtcaatt
ttggcttttg ttgtcattgc ttttggtgtt ttagacatga agtccttgcc catgcctatg
tcctgaatgg taatgcctag gttttcttct agggttttta tggttttagg tctaacattt
aagtctttaa tccatcttga attaattttt gtataaggtg taaggaaggg atccagtttc
agctttctac atatggctag ccagttttcc cagcaccatt tattaaatag ggaatccttt
ccccattgct tgtttttctc agctgtgtca aagatcagat agttttagat atgcggcgtt
atttctgagg gctctgttct gttccattgg tctatatctc tgttttggca acagtagcat
gctgttttgg ttactgtagc cttgtagtat aatttgaagt caggtagcgt gatgcctcca
gctttgttct tttggcttag gattgacttg gcgatgcggg ctcttttttg gttccatatg
aacattaaag tagttttttc caattctgtg aagaaagtca ttggtagctt CAAAGTGATT
TTTCTTTTCT TTACCCCTTA GGAACTAATA CAGAGCTGAT CAGTAAGTAT TTGCTGATTA
ATCAATTGCT GGGAAACAGG TTACTTATTT T
There is no frequency submission for ss12779098.
No sufficient data to compute Hardy-weinberg probability for ss12779098.
There is no individual genotype data for ss12779098.
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