NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss12809268           
Submitter
HandleSC_SNP
Submitter SNP IDNT_007422.12_3213196
RefSNP(rs#)rs4709437
Submitted Batch IDCHR20_NA11321_extra
Submitted DateNov 14, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 21 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA11321
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:Chr_20-47841494h10.q1kposition:165quality:42sequence:Chr_20-47841494h10.p1kposition:-341quality:46

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12809268|allelePos=2000|len=4000|taxid=9606|alleles='G/T'|mol=Genomic
 atataatatt gtttttgatt tactattttt ctaggtagag gcaactctaa tggcttcaat
 ttggcctttc ccatccataa cagccctcac cctaccagta agggagccaa tgtggggttt
 ctgccagctg ctaagtatgt ctatgccaat taggcagttt ggcactgggg aaatgaccac
 aggataagtc caggtactaa ctggacccag tgtaagtcag acatgaacta aaatgccatt
 aattacctga cctccatatg cccctacttt aactggagga ccacaatgat gttttgtgtt
 ttctgggatc aacatcagct cagagccagt tttcagtagt ttccaaaacg tctgattatt
 tccctgtccc cagtgcacag ttaccctggt aaaaggccag aggtgtcctt gggaaggatg
 ggagaaagat aaacaccata aattgttggt agcttagtag ggtgcttcct taaggggacc
 cagcctcccc tttattcaag ggcttctggg tctgtaaact ggctcgagtc tggaaattaa
 ttgaggggcc atgattctgt gtcttaataa ttcagattag tcttttgtcc attctacctg
 gtagttttct gtttatataa attaagtagg aatgcagtag gctttctatc aatttcactt
 ctaggaacat cgtgattaat tagccagtgc cagagctcta cacgagtcag actattctga
 ttgttgcttt gcctctgctg tgcattatgg tagctatacc cagcattcct ctgatgggtc
 agtgttgcca cttggtccct ggccctcagg atccaattat tcccattgta tttaaatttt
 gtagttgagt gactgtggtt cccactgtta gatctgacat acagagaaga gcaattacag
 ggctcttgaa aaatgcaggt gctaccctca caaaactatt tcacaaagca ttggtcaagg
 gtatatattc tggaccctcc cagctgggat gagtaggtct aaagtgacta atccaacacc
 accatcctaa tctccctaag cctttggacc ccttcctcta cattaaacta agggagatca
 ggcatttcca gctcactcac agcaggccat cttttaatct atatttcggg taatcaagca
 aataaactat tagaaccttt tttaagtccc caagctgcaa cattaaatgc agaatcccta
 cttagtaggc ccacattaat aaattcagcc tgatccaact ctatgttact tccaccatta
 tcccagaccc ttaatatcca ttcccatgcc tgttctccat atttctgctt atataaatta
 gaaaactcaa gcaattcttt tagagtgtaa tgcatctcct catgggtcac actctgaacc
 tcacctcttg ggcccaacag gactttagtc tagttgtagg tctagaagca aacaagggca
 ttggagatgc ctcctaagga gaatcaacat tatcttgcct ggcaactgcc tcacgggagg
 ccgtcactgt tgcctcaagc agcgcagggt tcacatcctc agacaaaggt ggaaaggcta
 atggcagcat gggtcaggga ggggatgttg ccagtactga ggatggggaa gctgtttctt
 ttcgcaaaaa aaggttaatc aaagttcata aattcagtgt cctcagtttc atcagggtcc
 tctcacatgt ccccattcca agttacaggg ttccattctt ttctattcaa tgccctcact
 ttaacagtag acacctggca gggctgggca tgcacctttc attgcaggtt agctactcgc
 ataataagag cttgcatctg ttttactaca atttcaactc tttctctaca ggagttaaga
 ctctcactca gggcaatctt agcagatgtg tggctcagta tctgcttctg aagccaggag
 acagaatccc tgagtttatc attttctttc atcactttct ccagtgaact taggaccaac
 caacttcatt atgctcctt
 K
 gttctccaca tatagtcaaa ggtattatgc atagagtcac taaactcctt ccctcatgag
 tggtgaatca ggagtgtcaa atgcatttat tttgcctaac tctttaaaca gttcatgcca
 aggactatca gtgttctcca tactattaga agtagagtgc tttgcatttt tgggtctaat
 catattaagc agtcatatcc agaaatctca aaaccaatga aagaactcca tccttaatat
 tctgttcctc cagaaccact cctggttcca aaatctatat tactcagggt tctctagagg
 gataaaacta ataggataca cacacacaca cacacacaca cacacacaca cacacacaca
 cacacacaaa ggggacctta ttaagtagta tcaactcaca agattacatg gtcccataat
 aggccatctg caacctgaga agcaaggaag ccattctgag tcccaaagct gaagaacttg
 gagtccgatg ttcaagggta gaaagcatcc agcacaagag aaagacgtag gctgggaagc
 taggccagtc tagccttttt acatttttct gtctgctttg tattctggcc acgctgccaa
 ctgattagat ggtgcccacc cagattaagg gtgggtctgc cttcccagcc cacttactaa
 atgttaatct cctttggcaa caacctcaca gacacaccca ggatcaatat tttgcatcct
 tcaatccaat caagttgaca atccgtatta atcatcacaT AAACAATAGT AATATACTCA
 AATATGTATC TTAAGGATGG TTGTTCTTTA TACTACCTCA TTGAggttct ctgaatttcc
 tgagtttgtg tgtcgacctc tctagttaga ctgggtaaat tttcatggac aatatcctca
 aatatgtttt cctcattgct tgctctctct ccctttcagg gacaccaatg agtcatagat
 ttggtctctt tacataatcc catatttctc agaggctttg ttcatttttt aaaattcttt
 ttctttattt ttgtctgatt atgttaattt gaagaaacag tattcaaggt ctgagattct
 ttccttaact acttttatta tactaatatt tctgattgtg ctatgacatt caatagtgag
 gtttttttta gctctacaag agagggttgg ttctttcttc aaatggcttg tctttcatct
 cttgaatcat tttacttcat tccttagatt acttgaaaga ggtttcaatt ttctcctgaa
 tctcaatgct ctttgttgcc acccagattc tgaattccat gtctgtcatt tcagtcattt
 ccttctggtt aggagccatt gctggagagc tagtgtggtc atttggagat aaggagacag
 tttggcttgc agagttgcca gaattcttgc gctgcttctt tctcatttgt gtgacctgat
 gttcctttaa ctatgatata agttgacttc atttctggat gttttcagag ggccaaggtg
 gtgtacaagg tctttatttg tggttgaatt cttgtccatg gttttacggg gtggtatatt
 agcaaagtat tttggatttt gaagattttg attttgcaaa ctaacaggta ggctcttCTT
 CAGCCACATG GCTCCTCTGT ATTTCCTCAC AATTgcttct ctcccacttg agttccagtt
 gcagatctca gcttagcatt ctttggccgt gtaccgcagc cctggggcaa gctcagcttt
 gttttggctc catagcttgg gagaagcagg ggcaggggcg tcagggtgct tgcagggaag
 acacactaaa ctttttttcc atagggtggc tggggcctgc tggtgtgtga ataaagcact
 caggatcttt gtttcttccc cagtccacag acagcaaggg cagtaccact gcagtggcag
 tggcagatgg gctttcagtc gcctctggga gctccatccC ACAGAAACAC AGAGAGCTGC
 CAATGGAAAT GTTCAGCTGA

  Submitted Frequency for ss12809268 back to top
There is no frequency submission for ss12809268.


  dbSNP summary of Genotypes for ss12809268 back to top
No sufficient data to compute Hardy-weinberg probability for ss12809268.


  Submitted individual genotype for ss12809268 back to top
There is no individual genotype data for ss12809268.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement