Submitter | Handle | SC_SNP | Submitter SNP ID | NT_007422.12_3213196 | RefSNP(rs#) | rs4709437 | Submitted Batch ID | CHR20_NA11321_extra | Submitted Date | Nov 14, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007422
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA11321 | Ascertainment Samplesize | 3 | Population | N.D. |
| Allele | Observed Allele | G/T | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | Unknown |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:Chr_20-47841494h10.q1kposition:165quality:42sequence:Chr_20-47841494h10.p1kposition:-341quality:46 |
>gnl|dbSNP|ss12809268|allelePos=2000|len=4000|taxid=9606|alleles='G/T'|mol=Genomic atataatatt gtttttgatt tactattttt ctaggtagag gcaactctaa tggcttcaat
ttggcctttc ccatccataa cagccctcac cctaccagta agggagccaa tgtggggttt
ctgccagctg ctaagtatgt ctatgccaat taggcagttt ggcactgggg aaatgaccac
aggataagtc caggtactaa ctggacccag tgtaagtcag acatgaacta aaatgccatt
aattacctga cctccatatg cccctacttt aactggagga ccacaatgat gttttgtgtt
ttctgggatc aacatcagct cagagccagt tttcagtagt ttccaaaacg tctgattatt
tccctgtccc cagtgcacag ttaccctggt aaaaggccag aggtgtcctt gggaaggatg
ggagaaagat aaacaccata aattgttggt agcttagtag ggtgcttcct taaggggacc
cagcctcccc tttattcaag ggcttctggg tctgtaaact ggctcgagtc tggaaattaa
ttgaggggcc atgattctgt gtcttaataa ttcagattag tcttttgtcc attctacctg
gtagttttct gtttatataa attaagtagg aatgcagtag gctttctatc aatttcactt
ctaggaacat cgtgattaat tagccagtgc cagagctcta cacgagtcag actattctga
ttgttgcttt gcctctgctg tgcattatgg tagctatacc cagcattcct ctgatgggtc
agtgttgcca cttggtccct ggccctcagg atccaattat tcccattgta tttaaatttt
gtagttgagt gactgtggtt cccactgtta gatctgacat acagagaaga gcaattacag
ggctcttgaa aaatgcaggt gctaccctca caaaactatt tcacaaagca ttggtcaagg
gtatatattc tggaccctcc cagctgggat gagtaggtct aaagtgacta atccaacacc
accatcctaa tctccctaag cctttggacc ccttcctcta cattaaacta agggagatca
ggcatttcca gctcactcac agcaggccat cttttaatct atatttcggg taatcaagca
aataaactat tagaaccttt tttaagtccc caagctgcaa cattaaatgc agaatcccta
cttagtaggc ccacattaat aaattcagcc tgatccaact ctatgttact tccaccatta
tcccagaccc ttaatatcca ttcccatgcc tgttctccat atttctgctt atataaatta
gaaaactcaa gcaattcttt tagagtgtaa tgcatctcct catgggtcac actctgaacc
tcacctcttg ggcccaacag gactttagtc tagttgtagg tctagaagca aacaagggca
ttggagatgc ctcctaagga gaatcaacat tatcttgcct ggcaactgcc tcacgggagg
ccgtcactgt tgcctcaagc agcgcagggt tcacatcctc agacaaaggt ggaaaggcta
atggcagcat gggtcaggga ggggatgttg ccagtactga ggatggggaa gctgtttctt
ttcgcaaaaa aaggttaatc aaagttcata aattcagtgt cctcagtttc atcagggtcc
tctcacatgt ccccattcca agttacaggg ttccattctt ttctattcaa tgccctcact
ttaacagtag acacctggca gggctgggca tgcacctttc attgcaggtt agctactcgc
ataataagag cttgcatctg ttttactaca atttcaactc tttctctaca ggagttaaga
ctctcactca gggcaatctt agcagatgtg tggctcagta tctgcttctg aagccaggag
acagaatccc tgagtttatc attttctttc atcactttct ccagtgaact taggaccaac
caacttcatt atgctcctt
K
gttctccaca tatagtcaaa ggtattatgc atagagtcac taaactcctt ccctcatgag
tggtgaatca ggagtgtcaa atgcatttat tttgcctaac tctttaaaca gttcatgcca
aggactatca gtgttctcca tactattaga agtagagtgc tttgcatttt tgggtctaat
catattaagc agtcatatcc agaaatctca aaaccaatga aagaactcca tccttaatat
tctgttcctc cagaaccact cctggttcca aaatctatat tactcagggt tctctagagg
gataaaacta ataggataca cacacacaca cacacacaca cacacacaca cacacacaca
cacacacaaa ggggacctta ttaagtagta tcaactcaca agattacatg gtcccataat
aggccatctg caacctgaga agcaaggaag ccattctgag tcccaaagct gaagaacttg
gagtccgatg ttcaagggta gaaagcatcc agcacaagag aaagacgtag gctgggaagc
taggccagtc tagccttttt acatttttct gtctgctttg tattctggcc acgctgccaa
ctgattagat ggtgcccacc cagattaagg gtgggtctgc cttcccagcc cacttactaa
atgttaatct cctttggcaa caacctcaca gacacaccca ggatcaatat tttgcatcct
tcaatccaat caagttgaca atccgtatta atcatcacaT AAACAATAGT AATATACTCA
AATATGTATC TTAAGGATGG TTGTTCTTTA TACTACCTCA TTGAggttct ctgaatttcc
tgagtttgtg tgtcgacctc tctagttaga ctgggtaaat tttcatggac aatatcctca
aatatgtttt cctcattgct tgctctctct ccctttcagg gacaccaatg agtcatagat
ttggtctctt tacataatcc catatttctc agaggctttg ttcatttttt aaaattcttt
ttctttattt ttgtctgatt atgttaattt gaagaaacag tattcaaggt ctgagattct
ttccttaact acttttatta tactaatatt tctgattgtg ctatgacatt caatagtgag
gtttttttta gctctacaag agagggttgg ttctttcttc aaatggcttg tctttcatct
cttgaatcat tttacttcat tccttagatt acttgaaaga ggtttcaatt ttctcctgaa
tctcaatgct ctttgttgcc acccagattc tgaattccat gtctgtcatt tcagtcattt
ccttctggtt aggagccatt gctggagagc tagtgtggtc atttggagat aaggagacag
tttggcttgc agagttgcca gaattcttgc gctgcttctt tctcatttgt gtgacctgat
gttcctttaa ctatgatata agttgacttc atttctggat gttttcagag ggccaaggtg
gtgtacaagg tctttatttg tggttgaatt cttgtccatg gttttacggg gtggtatatt
agcaaagtat tttggatttt gaagattttg attttgcaaa ctaacaggta ggctcttCTT
CAGCCACATG GCTCCTCTGT ATTTCCTCAC AATTgcttct ctcccacttg agttccagtt
gcagatctca gcttagcatt ctttggccgt gtaccgcagc cctggggcaa gctcagcttt
gttttggctc catagcttgg gagaagcagg ggcaggggcg tcagggtgct tgcagggaag
acacactaaa ctttttttcc atagggtggc tggggcctgc tggtgtgtga ataaagcact
caggatcttt gtttcttccc cagtccacag acagcaaggg cagtaccact gcagtggcag
tggcagatgg gctttcagtc gcctctggga gctccatccC ACAGAAACAC AGAGAGCTGC
CAATGGAAAT GTTCAGCTGA
There is no frequency submission for ss12809268.
No sufficient data to compute Hardy-weinberg probability for ss12809268.
There is no individual genotype data for ss12809268.
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