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Submitted SNP(ss) Details: ss12953975           
Submitter
HandleSC_SNP
Submitter SNP IDNT_008583.15_11051401
RefSNP(rs#)rs4948265
Submitted Batch IDCHR10_Overlap_SNPs
Submitted DateOct 22, 2003
Publication Cited[1] Overlap SNPs found by comparing shotgun reads to finished sequence
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 22 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR10_OVERLAP_SNPS
Ascertainment Samplesize6
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:10bA338F14-6h08.q1cposition:292quality:45sequence:10bA338F14-1f07.q1cposition:-339quality:33sequence:10bA338F14-28b10.q1cposition:-112quality:40sequence:10bA338F14-22e05.p1cposition:-350quality:40sequence:10bA338F14-28b10.p1cposition:406quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12953975|allelePos=300|len=450|taxid=9606|alleles='T/G'|mol=Genomic
 CATCTAGGAT GCAGGGGAAG AGGAATAAAA AAAGTGACAC CTTCAGAACA GAATTTGGGG
 GAATAAAGAG GGCCAGACTT TCAATTAAAA TATTTTCATC Tggccaggtg ctctatctca
 cagctgtaat cccagcattt tgggaggctg aggcaggtgg atcatttgag cctaagagtt
 tgagaccagc ctgggcaaaa caccatctct acaaagaaaa aaaaaaaaag aattaaaaat
 tagtcgggca tgatggtgca tgcctgtggt cccagctatt tccaaggccg aggcaggag
 K
 atcacctagc ttgacccccg gaggtggagg ctgcagtgaa ctgtgattgt gccactgcac
 tcctgcctgg gcgacagcca gaccctgtct caaaaaataa aaTTTCATTT TTATTTCTTC
 CCACATAACT CCTGTTAGTC CTTTCTCGTT

  Submitted Frequency for ss12953975 back to top
There is no frequency submission for ss12953975.


  dbSNP summary of Genotypes for ss12953975 back to top
No sufficient data to compute Hardy-weinberg probability for ss12953975.


  Submitted individual genotype for ss12953975 back to top
There is no individual genotype data for ss12953975.