Submitted SNP(ss) Details: ss15355284

Submitted SNP(ss) Details: ss15355284

Submitter
Handle	IIPGA-WEISS-MARTINEZ
Submitter SNP ID	IIPGA-FOXP3_8048
RefSNP(rs#)	rs3761548
Submitted Batch ID	2.7
Submitted Date	Nov 14, 2003
Publication Cited	N.D.
First entry to dbSNP	Nov 14 2003 12:00:00:000AM

Resource Links
GenBank Accession	NT_011568.12
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	METHOD-4
Ascertainment Samplesize	94
Population	N.D.

Allele
Observed Allele	C/A
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 3
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 AGATCTCAGG GCCTCACCGA AATGCAGCGG CAGAGTTGAA ATCCAAGCCT AGATCTCAGG
 ACTCTAGGTG GGACCCTGGT TCTGGCTCTC TCCCCAACTG
 M
 AGGCCTCAGT TTACCCCTCA GCACCCAGAA GGGGGAAGGG GAACCTGGGC TACCATTCCC
 CCTTCTGCCT TCTCACACGT TGGACCCCAA CTTCCCACAG

Submitted Frequency for ss15355284

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
E-1 - EUROPE	6	A=1.00000000			A/A=1.00000000		2.7	IIPGA-WEISS-MARTINEZ
E-0 - NORTH AMERICA	40	A=0.55000001	C=0.44999999	0.495 +/-0.022	A/C=0.40000001 A/A=0.34999999 C/C=0.25000000	0.400	2.7	IIPGA-WEISS-MARTINEZ
D-0 - NORTH AMERICA	48	C=0.97899997	A=0.02100000	0.041 +/-0.056	C/C=0.95800000 A/C=0.04200000 A/A=0.00000000	0.042	2.7	IIPGA-WEISS-MARTINEZ

dbSNP summary of Genotypes for ss15355284

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
D-0 - NORTH AMERICA	48	48	C=0.72916669 0=0.25000000	A=0.02083333	0/C=0.50000000 C/C=0.45833334 A/C=0.04166667	Pr(chiSq=1.551,df=2) =0.497	Genotype Freq.
E-0 - NORTH AMERICA	40	40	A=0.37500000 C=0.37500000	0=0.25000000	A/C=0.40000001 0/A=0.34999999 0/C=0.15000001 C/C=0.10000000	Pr(chiSq=4.204,df=2) =0.150	Genotype Freq.

Submitted individual genotype for ss15355284

There is no individual genotype data for ss15355284.

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