NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss287939202           
Submitter
HandleGMI
Submitter SNP IDGMI_AK_INDEL_13
RefSNP(rs#)rs200379008
Submitted Batch ID2009AK_INDEL
Submitted DateDec 20, 2010
Publication CitedN.D.
First entry to dbSNPDec 20 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodDIRECT DNA SEQUENCING
Ascertainment Samplesize2
PopulationAK_Koreans
Allele
Observed AlleleT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
Chromosome-1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss287939202|allelePos=501|len=1001|taxid=9606|alleles='T/-'|mol=Genomic
 GACTTTCTTC TTATTAGCTG CATATATTTT GTGGTGGATT TGTACCACAT TTACTTTATC
 TAGTCCAAAG TTGTTGGGCA CCCAGGTGGA TTCCATGTCT TTGCTATTGT GAATAGCACT
 GGGACAACCC ATACAAGTTC ATGTGTCTTT TTGGTAAAAC AATGTATTTT CCTTTGGGCA
 TATATGCGGT GATGGAATTG CTGGATCGAG TGGTAGTTTA ACTCTTAGTT CTTTGAGAAA
 TCCCCAGACT GTTCTCCACA GTGGCTGGAC TAAGTTGCAT TCCCACCAGC AGTGTAGAAG
 TGTTCCCCAT TCTCTGTAGC CTCACCAGCA CATGTTAAAC TATCTTTAAA TATATGAAAA
 AAATGTTCAA GTCTCTCAGA TTAAGATGCA TGCAAAGTAA AATGATACTT AAATATCAGT
 TCTAACCTAT AAAATATCAA ATATCTGACC TCAATATTTG ATAATCCAAC CTGTTGATGA
 AGCTGTAGAG AGAGGCACCC
 N
 TTTTTTTTTT TTTAATTATA CTTTAAGTTT TAGGGTACAT GTGCACCTTG TGCAGGTTAG
 TTACATATGT ATACATGTGC CATGCTGGTG CGCTGAACCC ACTAACTCGT CATCTAGCAT
 TAGGTATATC TCCCAATGCT ATCCCTCCCC CCTCCCCCCA CCCCACAACA GTCCCCAGAG
 TGTGATATTC CCCTTCCTGT GTCCATGTGA TCTCATTGTT CACTTCCCAC CTATGAGTGA
 GAATATGCGG TGTTTGGTTT TTTGTTCTTG CGATAGTTTA CTGAGAATGA TGATTTCCAG
 TTTCATCCAT GTCCCTACAA AGGACATGAA CTCATCATTT TTTATGGCTG CATAGTATTC
 CATGGTGTAT ATGTGCCACA TTTTCTTAAT CCAGTCTATC ATTGTTGGAC ATTTGGGTTG
 GTTCCAAGTC TTTGCTATTG TGAATAATGC CGCAATAAAC ATACGTGTGC ATGTGTCTTT
 ATAGCAGCAT GATTTATAGT

  Submitted Frequency for ss287939202 back to top
There is no frequency submission for ss287939202.


  dbSNP summary of Genotypes for ss287939202 back to top
No sufficient data to compute Hardy-weinberg probability for ss287939202.


  Submitted individual genotype for ss287939202 back to top
There is no individual genotype data for ss287939202.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement