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Submitted SNP(ss) Details: ss35035695           
Submitter
HandleEGP_SNPS
Submitter SNP IDCDC14A-014133
RefSNP(rs#)rs28361191
Submitted Batch IDCDC14A-PDR90-020805
Submitted DateFeb 09, 2005
Publication Cited[1] NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
First entry to dbSNPFeb 9 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		GENOMIC
MethodMETHOD-E
Ascertainment Samplesize152
PopulationPDR90
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Homozygote DetectedY
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35035695|allelePos=256|len=511|taxid=9606|alleles='C/G'|mol=Genomic
 CAGCTAATTT TTGTATTTTT TTTTTTAATA GAGACAGGGT TTCACCATGT TGGCCAGGAT
 GGTCTCAATC TCTTGACCTC GTGATCCGCC CGCCTCGGCC TCCCAAAGTG CTGGGATTAC
 AGGCGGAGCC GTTGCCCCCG GCCCTGTGAT CCTCACCACA AATTTTAGAG TAATTATTTT
 CCTTTTGAGA GCCTCAGCCA CTTTATGAAA TCTGAGGGTT AGCCTTTTAT GTATGGGGGA
 ATCGCTCATC ATTCT
 S
 TTTTCTAACA AAGCTTTGCA TATACTGTCT GTATAGCTCT CCTGCCTTCA GTACTAGCCA
 TTGAATAATG GAGTTAATTT ACACTGCTTG AGAATATTTC TGTGGGAGTG AATTTTAATT
 TTCCCAGTGC ATTCCTGAAG AAGTCTCCTT TTGTTTTCGT TAATCTGAGT CTCTAAGGGA
 GTTTTTATTA ACTGACCTTC TCTAACGAGG GATGTTAGAA TTACAGACCC TGATACTGGA
 AGGTTTCTTG ATACC

  Submitted Frequency for ss35035695 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
PDR90152G=0.92763197
C=0.07236800
CDC14A-PDR90-020805EGP_SNPS


  dbSNP summary of Genotypes for ss35035695 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
PDR90152152G=0.92763156
C=0.07236842G/G=0.86842108
C/G=0.11842106
C/C=0.01315789
Pr(chiSq=1.058,df=1)
=0.317		Genotype
Freq.

  Submitted individual genotype for ss35035695 back to top
There is no individual genotype data for ss35035695.

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