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Submitted SNP(ss) Details: ss35035702           
Submitter
HandleEGP_SNPS
Submitter SNP IDCDC14A-014909
RefSNP(rs#)rs28361194
Submitted Batch IDCDC14A-PDR90-020805
Submitted DateFeb 09, 2005
Publication Cited[1] NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
First entry to dbSNPFeb 9 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		GENOMIC
MethodMETHOD-E
Ascertainment Samplesize154
PopulationPDR90
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote DetectedY
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35035702|allelePos=256|len=511|taxid=9606|alleles='A/G'|mol=Genomic
 TAATAAAGAT GATAAGTTTC CTAATACATG TAGCTGCTTT GTAGTCTGTG GGTTTGCTTT
 CTGGCTGTGC AGAAAACAGT GAATTTCATG GAAAAAGTTG TGTTCTTTTC CTTCCTCAAA
 GAGGAGACAC TCTGAGGGAA ATGTTTTCTG TACCCAGACC CAATGCACTG AGAGGACAGA
 CAGAACAGAG AACATCAAAT AGGGCAAGTA GACCTTGAGA AACATTTGAA CAGTTGAATG
 GGTTTGTCCA ATAAG
 R
 ATAACTAGAG TCATAGACTC TGTAGAGTCT ATATAGCGGC TAGAACTGTG ATATATGATA
 TTACATAAGA GCTGGAAAGA ACTTTAGGAG CCATCTAATT CAGTGGCTTC ATTTGATAGA
 TGAGGACGTG GAGTCCCAGA GAGGCTACGA CACCAGATTA GGGACACTGA GTGACCAAAT
 TGGGACTGGA ACCTTTTGGC ACCCAGTGAT CTTTAGTTCT GCATCAGACT GCTGTGTGTG
 TGGGAAGCTT GTTAG

  Submitted Frequency for ss35035702 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
PDR90154G=0.99350601
A=0.00649400
CDC14A-PDR90-020805EGP_SNPS


  dbSNP summary of Genotypes for ss35035702 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
PDR90154154G=0.99350649
A=0.00649351G/G=0.98701298
A/G=0.01298701
Pr(chiSq=0.000,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss35035702 back to top
There is no individual genotype data for ss35035702.

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