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Submitted SNP(ss) Details: ss35035704           
Submitter
HandleEGP_SNPS
Submitter SNP IDCDC14A-015400
RefSNP(rs#)rs28361195
Submitted Batch IDCDC14A-PDR90-020805
Submitted DateFeb 09, 2005
Publication Cited[1] NIEHS-SNPs, Environmental Genome Project, NIEHS ES15478.
First entry to dbSNPFeb 9 2005 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		GENOMIC
MethodMETHOD-E
Ascertainment Samplesize106
PopulationPDR90
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Homozygote DetectedY
Variation
Frequency Submissionpopulation count: 1
Genotype Summarypopulation count: 1
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss35035704|allelePos=256|len=511|taxid=9606|alleles='A/G'|mol=Genomic
 GTGTGTGGGA AGCTTGTTAG ATGTGCAGCA ACTCTTCCCC AAGAAGTTGG CATCAGTGTG
 ACTGTGGGTG GTTATGCTAA AGGGCTTGAG CAAAAACTCA GACTAGTGCC CTCATCTGAG
 GTTGGTATTT GTTATGCAGT TAGGACCTTT TTAAAATGTG ATCATTATGA GTTCAGCCAT
 AATAATCACG TCTCATACAG AAACTTTATC ATCTGACTGG AGGGGTGCGG ATAGTATTCT
 AGTGATAGGG AAACT
 R
 TTAGGTAATG TGTGGCCCAG AGGCATTGCT GATCAATTTC AACAAAATTT TACACACACA
 CACACACACA CACACACACA CACACACGGT CTCATTGTGT TTTGGAGGAT ACTGCTATTT
 TAGCATTTAT CACATTGTAA TAATGTCTTT ACCTGTCTTC TCAGTAGATA GTGAGCTCCT
 TGTGGGTAGG GACTGGTGAC CAATAGGCTT TTAGTAACTA TTTGAGTGAG CAAGTGAATG
 AAGAGACAAA AAACG

  Submitted Frequency for ss35035704 back to top

Population ID
 -Class		Sample
(2n)		Major
Allele
Freq.		Minor
Allele
Freq.		Estimated
Heterozygosity
+/-std.err.		Genotype
Freq.		Submitted
Hetero-
zygosity		Submission
Batch		Submitter
PDR90106G=0.98113197
A=0.01886800
CDC14A-PDR90-020805EGP_SNPS


  dbSNP summary of Genotypes for ss35035704 back to top

Population ID
 -Class		Total
Sample
(2N)		Founder
(2N)		Major
Allele
Freq.		Minor
Allele
Freq.		Genotype
Freq.		HWE Goodness of FitData
Source
PDR90106106G=0.98113209
A=0.01886792G/G=0.96226418
A/G=0.03773585
Pr(chiSq=0.001,df=1)
=1.000		Genotype
Freq.

  Submitted individual genotype for ss35035704 back to top
There is no individual genotype data for ss35035704.

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