Submitted SNP(ss) Details: ss69371809

Submitted SNP(ss) Details: ss69371809

Submitter
Handle	TAPPERS
Submitter SNP ID	ADRB2x1b_R281_A/G
RefSNP(rs#)	rs1042713
Submitted Batch ID	RDT2007March29
Submitted Date	Mar 29, 2007
Publication Cited	N.D.
First entry to dbSNP	Mar 29 2007 12:00:00:000AM

Resource Links
GenBank Accession	NT_029289
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	RDT-PYROSEQUENCING
Ascertainment Samplesize	866
Population	MOTWINS

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	G:Germline A:Germline
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	N.D.
Genotype Submission	N.D.
Haplotype	N.D.

Comment

Conditions for pyrosequencing are listed below:Biotinylated forward primer: GCGCTCACCTGCCAGACTReverse primer: TCCCTTTCCTGCGTGACGTSequencing primer (reverse direction): CCGGCGCATGGCTTCPCR conditions for pyro sequencing:Template: 6 ng genomic DNA in 15uL final reaction volumePrimer: each 0.27uMdNTPs:each 0.125mM;PCR buffer: 1.5ul (10x) AmpliTaq Gold buffer, Mg 1.5mM, Taq Gold Polymerase: 0.027units/ul5 min 95C denature and 10 min 72C final extension; 50 cycles: 20s at 95C, 30s at 61C, 20s at 72C

Fasta sequence (Legend)

 GCGCCATGGG GCAACCCGGG AACGGCAGCG CCTTCTTGCT GGCACCCAAT
 R
 GAAGCCATGC GCCGGACCAC GACGTCACGC AGGAAAGGGA CGAGGTGTGG

Submitted Frequency for ss69371809

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
MOTWINS - NORTH AMERICA	866	G=0.83399999	A=0.16599999				RDT2007March29	TAPPERS

dbSNP summary of Genotypes for ss69371809

No sufficient data to compute Hardy-weinberg probability for ss69371809.

Submitted individual genotype for ss69371809

There is no individual genotype data for ss69371809.

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