Submitter | Handle | TAPPERS | Submitter SNP ID | ADRB2x1b_R487_A/G | RefSNP(rs#) | rs1042717 | Submitted Batch ID | RDT2007March29 | Submitted Date | Mar 29, 2007 | Publication Cited | N.D. | First entry to dbSNP | Mar 29 2007 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_029289
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| | Allele | Observed Allele | A/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | N.D. |
| | Variation | Frequency Submission | population count: 1 | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | PCR reactions used genomic DNA; products were analyzed by DHPLC, sequencing and pyrosequencing.Conditions for pyrosequencing are listed below:Biotinylated forward primer: ACGGTCACCAACTACTTCATCACTReverse primer: AAGTTGCCAAAAGTCCACATTTTCSequencing primer: AAAGGGCACCACTGC (reverse direction)PCR conditions for pyro sequencing:Template: 6 ng genomic DNA in 15uL final reaction volumePrimer: each 0.2uM,dNTPs:each 0.125mMPCR buffer: 1.5ul (10x) AmpliTaq Gold buffer, Mg 1.5mM, Taq Gold Polymerase: 0.02units/ul5 min 95C denature and 10 min 72C final extension; 50 cycles: 20s at 95C, 30s at 59C, 20s at 72C |
>gnl|dbSNP|ss69371811|allelePos=51|len=101|taxid=9606|alleles='A/G'|mol=Genomic ACCAACTACT TCATCACTTC ACTGGCCTGT GCTGATCTGG TCATGGGCCT
R
GCAGTGGTGC CCTTTGGGGC CGCCCATATT CTTATGAAAA TGTGGACTTT
Population ID -Class | Sample (2n) | Major Allele Freq. | Minor Allele Freq. | Estimated Heterozygosity +/-std.err. | Genotype Freq. | Submitted Hetero- zygosity | Submission Batch | Submitter | MOTWINS - NORTH AMERICA | 860 | G=0.78600001
| A=0.21400000
| | | | RDT2007March29 | TAPPERS |
No sufficient data to compute Hardy-weinberg probability for ss69371811.
There is no individual genotype data for ss69371811.
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