NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss7991031           
Submitter
HandleSC_SNP
Submitter SNP IDNT_011516.5_125504
RefSNP(rs#)rs5746264
Submitted Batch ID10-APR-2003
Submitted DateApr 15, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPApr 15 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR22_NA11321
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:22SNP11321160m17.p1kposition:114quality:37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss7991031|allelePos=401|len=801|taxid=9606|alleles='T/C'|mol=Genomic
 ctagatccct gaggaatcgc aacactgact tccacaatgg ttgaactagt ttacagtacc
 accaacagtg taaaagtgct actatttctc cacatcctct ccagcacctg ttgtttcctg
 actttgtaat gatcgccatt ctaactggtg tgagatggta tctcattgtg gttttgattt
 gcatttctct gatggccagt gatgatgaac attttttcat gtgtcttttg gctgcataaa
 tgtcttcttt tgagaagtgt ctgttcatat ccttcgccca cttgttgatg gggttgtttg
 tttttttctg gtaaatttga cttcattgta gattctggat attagccctt tgtcagatga
 gtagattgca aaaatttcct cccattctgt aggttgcctg
 Y
 tcactctgat ggtagcttct tttgctgtgc agaagctctt tagtttaatt agatcccatt
 tgtcaatttt ggcttttgtt gccattgttt ttggtgtttt taaacatgaa gtccttgccc
 atgcctatgt cctgaatggt attgcctagg ttttcttcta gggtttttat ggttttgggt
 ctaacattta agtctttaat ccatcttgaa ttaatttttg tataaggtgt aaggaaggga
 tccagtttca gctttctaca tatggctagc tgggcaatgt caactttgta aattaactga
 gaactgtctc agattttgag ggttcacaaa ctatactcca aggatatagt aaccaaaaca
 tcataggtct ggtacaaaaa ccatgacaca aaagccaatg

  Submitted Frequency for ss7991031 back to top
There is no frequency submission for ss7991031.


  dbSNP summary of Genotypes for ss7991031 back to top
No sufficient data to compute Hardy-weinberg probability for ss7991031.


  Submitted individual genotype for ss7991031 back to top
There is no individual genotype data for ss7991031.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement