Submitted SNP(ss) Details: ss80743685

Submitted SNP(ss) Details: ss80743685

Submitter
Handle	KRIBB_YJKIM
Submitter SNP ID	KHS1000029
RefSNP(rs#)	rs3071
Submitted Batch ID	KHB2007_2_SEQUENOM
Submitted Date	Nov 26, 2007
Publication Cited	16376517
First entry to dbSNP	Nov 26 2007 12:00:00:000AM

Resource Links
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	SEQUENOM_MASS_ARRAY
Ascertainment Samplesize	180
Population	KHP_Korean

Allele
Observed Allele	G/T
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	N.D.

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	population count: 1
Genotype Summary	population count: 2
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TCTATGGCTA CGGGCCCGTG GGATGTTAAA AATTGGGATT TTAAATTAAG ATTGTGAACA
 TGCAAACCCA GCAAATTTCT CAGCTTATAT TTTGAAAGTC
 K
 CAGGAGAAAA AATGGGGTCC CTAATGACCM SGTGCCAGGG CCATATCCCC ACCTCCATCA
 GGGCTTCACT CACCTCCTCT GGAACATCAC CAGTTTCTCA

Submitted Frequency for ss80743685

Population ID -Class	Sample (2n)	Major Allele Freq.	Minor Allele Freq.	Estimated Heterozygosity +/-std.err.	Genotype Freq.	Submitted Hetero- zygosity	Submission Batch	Submitter
KHP1 - EAST ASIA	180	T=0.68333298	G=0.31666699		T/T=0.48888901 G/T=0.38888901 G/G=0.12222200		KHB2007_2_SEQUENOM	KRIBB_YJKIM

dbSNP summary of Genotypes for ss80743685

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
KHP_Korean - EAST ASIA	180	180	T=0.68333334	G=0.31666666	T/T=0.48888889 G/T=0.38888890 G/G=0.12222222	Pr(chiSq=0.926,df=1) =0.343	Genotype Freq.

Submitted individual genotype for ss80743685

There is no individual genotype data for ss80743685.

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