NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss82328274           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr2_155036959-155036960_1
RefSNP(rs#)rs34183808
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleCACT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize71809559 49-54 47 forward 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82328274|allelePos=501|len=701|taxid=9606|alleles='CACT/-'|mol=Genomic
 TTTTTGCTGT TGTAGCTGAG CTTTTGGTGT GATATCTAAA AAATCTTGGC CATGGCCATG
 TCAGTTTTTC CTCTACGTTC CCTTCTAAGA CTTTTATGGT TTCAGATCTT ACATTTAAGT
 CCTTTGTTCA TTTTGAGTTA TTCTTTCTGG ATGGTGTGAA ATGGTGGTTC AATCTCACTT
 TTTTTTTTTT TGAATGTGGA AACTCACTTC TGCAAGCACC GTTTATCGAA GAGACCACCC
 TTTTCCCCAT TGTGTTCTCT TGGTGCCCTT GTTGAAAATT AGCTGATCAT AAATGTTTGG
 ATTTATTTCT AGGTTCTCTT CTATTCCACC GGTCGATGTT TCTGTTTATC TGCCAGACAT
 CATACTTCGT GATTTTAAAT TATAATTTGT AACCTTAGTT TCTCACAGCA GTTCTCTCTA
 CTGCTTCTTC ATGTCAGGGT TCTTCTACTC GAATGCCAGT GTTTCTATAC ATAGAATTTC
 CCATTGTTTT CTCTGACACT
 N
 AACTTTCTAC CTGACTGGAT TTCTGCCATT GCCTGCCATA ACCCTTCCCA GTCAGAAATT
 AGATTCAGTT GGAATTGAAT CATAATCCAT TTAATTTTTA CCTTTTCTTT TGTGGACTGA
 TTTTGGCCTT ACAAATGACC TTAAGCTTTT CAGACCCCAC TCAACTGCCA TTAGAATACT
 ACACGGCAGC TTTGTCCCCA

  Submitted Frequency for ss82328274 back to top
There is no frequency submission for ss82328274.


  dbSNP summary of Genotypes for ss82328274 back to top
No sufficient data to compute Hardy-weinberg probability for ss82328274.


  Submitted individual genotype for ss82328274 back to top
There is no individual genotype data for ss82328274.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement