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Submitted SNP(ss) Details: ss82328281           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr21_9913926-9913927_1
RefSNP(rs#)rs59695292
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleTTTT/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize71809563 140-145 57 forward 4

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82328281|allelePos=501|len=1001|taxid=9606|alleles='TTTT/-'|mol=Genomic
 AAATACTCAG CAATACATTA TGCATATATT ATTATTATCA TTGAGACGGA GTCTCCCTCT
 GTCACCCAGG CTGGAGTGCA GTGGCACAAT CTCCGCTCAC TGCAAGCTCC ATCTCCCGGC
 TTCATGCCAT TCTTCAGCTT CAGCCTCCCG AGTAGCTGGG ACTACAGGCG CCTGCCATCA
 CGCCTGGCTA ATTTTTTGTA TTTTTAGTAG AGACGGGGTT TCACTGTGTT AGCCAGGATG
 GGCTCTATCT CCTGGCCTCA TAATACGCCC GCCTCGGCCT CCCGAAATGT TGAGATTACA
 GGCGTGAGCC ATAGTGCCCG GCCGTTATAT GCATATTATT TTATAAACAA TTTATGATAA
 AGAGAAAATA TGCATTTCTA CTGTTTTTAT AATGTTAATA TTACCTATAC CAGTGCTTTT
 TTAAAAATGT GGATTCAAAT GACTGGCTTG TGTAACTTGC TTTTAGCCTT AGGAATTTAT
 TTTAGTGTTT TTTTTTTTTT
 N
 GTATGGTAGG TCTGCCAGCA ACAACTTCGG TTAATATTTT GGTTTATCTG TGTAAGTCTT
 TCTGTTATCT TCATTTTTGA AAAATAATTG CTCGATAAGG AATTGGTGGC TGACAGTTTT
 TTTCTTTGCA TCTTTTGAAT ATATTATTCT ACTGCCTCTT GCCTTCCATT GTTTCTGTTA
 AGTCAGCTGT TAATCTTAGA AAACCTAGGT GCTCAAAAAA TAAACATATG CATGAATATT
 TATAGCAGTA ATATTCTTAC AGTCAAAAAG TGGAAACAAT CCATATGCTT GTTGACTCAT
 AAATGGACAC CCAATTTCCA GCTATAACAA AGAATGAAGT ACTTATACAT GGTATAATAT
 GGGTGAAATT TGAAAGCATT ACGTTAAGTG CACAAAAGGA TAAATATTAC TTGATTTTAT
 TCACATGAAA CATCAGGAAT TGGCAAATCA ACTGGGATAT AAATCAGATT AGTGGTCATT
 AGGGCTCAGG GAAGCAGAAC

  Submitted Frequency for ss82328281 back to top
There is no frequency submission for ss82328281.


  dbSNP summary of Genotypes for ss82328281 back to top
No sufficient data to compute Hardy-weinberg probability for ss82328281.


  Submitted individual genotype for ss82328281 back to top
There is no individual genotype data for ss82328281.

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