NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss82328293           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr11_73556774-73556775_1
RefSNP(rs#)rs397695106
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleA/-
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize71809647 340-342 68 reverse 1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82328293|allelePos=317|len=626|taxid=9606|alleles='A/-'|mol=Genomic
 AAAATGAAGA CATCTTGGCT TCTGGTTCCC TACAGAGGGA TGCTTTCCAT TTCTGAACAT
 CTGTAATACT AACTCACTAA ACCATTCATT TAGCATTTAG TATGTATTAT CTTGTACTAT
 TGGTAAATTT TACATCTATA TCCTCTTTCC TTGAGTATAA TGTAAACCCC AGAGTTGAGA
 CTACAGTTAT TACCTAAAAA AGCATGGTGT AGTGAAAAGA GCATGAGTTT TGGTGACAGA
 CAGAAGTGGG TTCAAATCCT AATTCAGCCA TTTATCAACT TTGTGACCTT AGAAAGTATT
 CATTTCATCT CTCCAA
 N
 CTTGTTTAAT TGTCTATAAA ACAGAGAAAA TACCTATCTT TCAGGGTTAT TGTAAGGATT
 AGAAGTAATA CATTTCAAAA CTGCTGGCAC ACAGTAACAC TCAATAAATT TACAAAGAAA
 AATGTCTACT ATAAAAACTC TTTGACTCTT CAATAATTAA GAATGCCCAT ATATGCTAGG
 TACACAACAA CACTTATTGC TGACAATATA ACCACATGCT TTGTATTACG TCTGCAGGTG
 CAATGATAAA ACAATAACAT ACCTGTTAGA TAAGAGGTAA ACTGTTTTGG ACCACAACGA
 ATAGCGTAA

  Submitted Frequency for ss82328293 back to top
There is no frequency submission for ss82328293.


  dbSNP summary of Genotypes for ss82328293 back to top
No sufficient data to compute Hardy-weinberg probability for ss82328293.


  Submitted individual genotype for ss82328293 back to top
There is no individual genotype data for ss82328293.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement