NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss82328337           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr1_151078861-151078867_1
RefSNP(rs#)rs534098214
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/ACAAA
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize71809675 359-360 54 forward -5

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82328337|allelePos=501|len=808|taxid=9606|alleles='-/ACAAA'|mol=Genomic
 CCACCACTAC CTGCTAAGTT TTTGTATTTT TAGTAGAGAT GGGGTCTTGG TATGTTGCCC
 AGGCTGGTCT CAAACTCCTG AGCTCAAGCC GCTTTGGCCT CCCAAAAGTG CTGGGATTAA
 AGGTGAGCCA CCATGCCTGA CCCCTGTGGG AAAATTTTAA AAACAAGAAT AAATGGCCGG
 GCATGGTGGC TCATGCCTGT AATCCCAGCA CTTTCGGAGG CCGAGGTGGG AAGATCACCT
 GAGGTCAGGA GTTGAAGACC AGCCTGACCA ACATGGAGAA ACCCTGTCTC TACTAAAAAT
 ACAGAATTAG CCAGGCATAG TAGTGCATGC CTGTAATCCC AGCTACTCAC TACTCAGGAG
 GCTGAGGCAG GAGAATCACT TGACCCCTGG AGGCAGAGGT TGCAGTGAGC CAAGATCATG
 CCATTGCACT CCAGCCTGGA CAACAAAAGC AAAACTCCAT CTCAAACAAA ACAAAACAAA
 ACAAAACAAA ACAAAACAAA
 N
 CAAACAAACA AAAAAAACGA GAATAAAAAC TGAGCAGACA CATTAGCAGC TGCACACTGT
 GGAATGATAG ACTCTACAGT TTAACTCCAG ACAAATGACA CACACACACA CATCAGCATC
 ACCAGCATCA CCACCATTCA GAAAAATACA ATAGAATCCA GACTCTACGG TTTAACTCCA
 AATTACACAC ACACACACAC ACACACACAC ACACACCCCA TCAGCATCAC CAGCATCACC
 ACCTTTCGGA AAAATACAAC AGAATCCAGA GTTATTACAG TCTATTATCT AAAATGACCA
 GTTTTTT

  Submitted Frequency for ss82328337 back to top
There is no frequency submission for ss82328337.


  dbSNP summary of Genotypes for ss82328337 back to top
No sufficient data to compute Hardy-weinberg probability for ss82328337.


  Submitted individual genotype for ss82328337 back to top
There is no individual genotype data for ss82328337.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement