NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss82328355           
Submitter
HandleHGSV
Submitter SNP IDCor19240_DIV_20070510.chr7_14251318-14251320_1
RefSNP(rs#)rs58809333
Submitted Batch IDNA19240-Fosmids-20070510-DIPs
Submitted DateDec 02, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPDec 2 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA19240-FOSMIDS-DIPS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed Allele-/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassDIV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality orientation DIPsize71809701 17-18 47 reverse -1

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss82328355|allelePos=201|len=401|taxid=9606|alleles='-/T'|mol=Genomic
 CTATATTGTT ACTGCTTCTT AGTGAGGCTG ATGGAGTCGA ATTAGTAGGT CAAGAGAGCA
 AAGCTAGTCA GTTTTTTAAC AGTGCTACCA AGCACGTCAC ATTTGGAGGA CTCAGCACAG
 AATCCACCGA AAACATTTTG TTAATTTTGT ACTCATGTTC TAAACATTAT TTAAAAAGGA
 TCAAACACAG ACTCTCTCAT
 N
 AAAGAGATAT TGTCAAGCCT GAGTTTGATT ATGTGTTAAC TGAGAACAAT TTACTGCCCA
 AAGCCCCTAT ACAGTTAACA CAATAATTTA GATACAAACA GAAAGAAAAG TGCTATGAAT
 CTTGCTTCCT GGAGTGACAG AGGTTGGAGC GTGGGTGAGA TTTCAATGAA CTACATTTAT
 GAGTGGCCAG GAACTATAGA

  Submitted Frequency for ss82328355 back to top
There is no frequency submission for ss82328355.


  dbSNP summary of Genotypes for ss82328355 back to top
No sufficient data to compute Hardy-weinberg probability for ss82328355.


  Submitted individual genotype for ss82328355 back to top
There is no individual genotype data for ss82328355.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement