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Submitted SNP(ss) Details: ss108290034           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_86679_chr1_69721442
RefSNP(rs#)rs1952142
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 15 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:143

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss108290034|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 TCTATCGCAT GAGTGCCATT ATAGCACTGC CCTTATCTAA TGAGAAGTGT CCCTGGAGGC
 AGACATGAAT CTCACTTGCT TTTGAGAGAT GTATCATTTG TCCATGGTTA CAGAAATAGT
 GGTGATCTGC TCCTGTGTAA TTTAACATCC TCCTCTTGCA ACATTCATAA GAATCATCTA
 AGGGAGTAAA ACCTGAGTAA
 S
 AGTATCACGG CATTTAACCA AAGGGATATA ATTCTAATAT TATTCTCCTC CTATTTTCCA
 CGCTGCTACA ACACTTTTCT GTAAATATGT TCTTTGCTTT TATACTGGTA TCATATTATT
 TTCAGGATAA AACTTAGGGT CTTCTATGTG GCTTAGAAAA TCTTTCTGAC CTGATCCTGC
 CTGCCCTATC TGCATCACCT

  Submitted Frequency for ss108290034 back to top
There is no frequency submission for ss108290034.


  dbSNP summary of Genotypes for ss108290034 back to top
No sufficient data to compute Hardy-weinberg probability for ss108290034.


  Submitted individual genotype for ss108290034 back to top
There is no individual genotype data for ss108290034.

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