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Submitted SNP(ss) Details: ss109311556           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_1334913_chr5_110771074
RefSNP(rs#)rs152882
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:135

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109311556|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GGAGGCGGAG GTTGCAGTAA GCTGAGATCG CGCCACTGCA CTCTAGCCTG GGTGACAGAG
 AGAGACTCCT TAAAAAAAAA AAAAAGAAAA GAAAAACACA AAAACAACAC CCCAAAGTAT
 ACTAATAGAG AAGTACTCAC AGTGTCCTTT TGAGGTCCAG AAAGGCATGC ACTGTTTCTG
 ATTATCATGA ATAAAGAGAA
 R
 GAAAAAAGTG AGGAATCAAG CTGTAAGGAA ATAAGCTTTT AAGATTACAC ATTTTAATTA
 CATTAAAAAA TGCTCATTCC AAACAAGTAT ATGTAGACCA TGACAGGAAG GATATTATCA
 CAATATCTTA AACAAACAAC AACAACAAAA ACAACACTTT ACCCTAATTG ACAATTTGGC
 CTGTATGTAT TCTGTTCTTA

  Submitted Frequency for ss109311556 back to top
There is no frequency submission for ss109311556.


  dbSNP summary of Genotypes for ss109311556 back to top
No sufficient data to compute Hardy-weinberg probability for ss109311556.


  Submitted individual genotype for ss109311556 back to top
There is no individual genotype data for ss109311556.

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