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Submitted SNP(ss) Details: ss110500360           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_68787_chr1_58922321
RefSNP(rs#)rs6587837
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:118

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss110500360|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 TTCAGATGAA ATTTTGCATT GATTTCATAA TATACTAGTC TCTGTTACAA TATGAAAAAT
 GTATCCTTCT ACCCCAGGTC TTTGAGTAAA ACTGGCACTC CAAGATACAT AGCATGTATC
 TTGGAAGCCT AAGAGTAAGA ATAACCAAGT TAAGCTTTAT TCTGTTCTGA GGTATTAACT
 AAACCCTGGT GAGCTGCCTT
 K
 AAAATGCTTC TGTTTGGTTG AAAGATGGAG CATACAATCG ATGTATGATG AATCCATTCC
 ATTAGTTACC ACCTATGTCT AGACAACACC GAAACAAATC TTACCTACAG GGTAGAACTC
 ATTATCTACA TGAAGAGATA ATATCAAATT TCACTCAAGA CACTTACCAA TTTTATATAA
 TTATGTTCCT AGGCTTCAAA

  Submitted Frequency for ss110500360 back to top
There is no frequency submission for ss110500360.


  dbSNP summary of Genotypes for ss110500360 back to top
No sufficient data to compute Hardy-weinberg probability for ss110500360.


  Submitted individual genotype for ss110500360 back to top
There is no individual genotype data for ss110500360.

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