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Submitted SNP(ss) Details: ss110817166           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_1007588_chr4_154410339
RefSNP(rs#)rs10005231
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:119

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss110817166|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 AATAATCCTT ATATCAAAGT GACATATTTT GATGTGACAC AGTCCAACCT CTTCAACTAC
 GATAGTTGGA AAAACATATT CAATTTCAAT AAGAATATGA AAGGTAAATA TATGTTTAAA
 TATAGTCATG GCTAAAGGCA TAAGCAGACA TAGCTATATA AAGTATTTAT CCCCTTAGTT
 ACCACTGCTT TGAAGCCCAG
 Y
 GAGCATACCT CTTTGTACAA CATGCCCTCT TTTAATTTGT TTTGTTTGCC TGGCGAACAT
 GTGAGGATTT TATTGATTTA CAAAATAAAC AACAGGGAGC TGACTGTACT TGTACAGCAA
 TAAGGGTTGG CTTATTGGTC ATTTTGAGGT CACTGGCATT GACTTCTACC TTTATTTATT
 TATTTTTTAT TTTATTTTTT

  Submitted Frequency for ss110817166 back to top
There is no frequency submission for ss110817166.


  dbSNP summary of Genotypes for ss110817166 back to top
No sufficient data to compute Hardy-weinberg probability for ss110817166.


  Submitted individual genotype for ss110817166 back to top
There is no individual genotype data for ss110817166.

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