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Submitted SNP(ss) Details: ss110890506           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_116515_chr1_99788189
RefSNP(rs#)rs11806162
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:118

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss110890506|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 GAAAGACATA TACATATATT TATATATATG AAAAGATATA TAAATATTAT GCCCTTGGAT
 ATCTATCTTT ACTTATTCTG GTCAATGGAG GGGGAGGGTT AGAAATTAAT TAAATAATTC
 TTGGATTGTC CAGGCCTCTG ACGTTCCCAC CTTCTGATGC TTGCATCAGA AAACAGAAGG
 GAACAAAGGA AAAAAACACA
 Y
 ATGGCAATTT TGCTACAGTT TGAAGTTAGT TCTGCTTGGA GTTGGCTTTA AAGGGACAAG
 AGAACGGATA TACTGGTCAA AGTAACATCA GTTTTATGTA ACCACCCAGT CATCACAGGT
 GCTTCCGTTG GTACCAGCTT AGAGCTGAAC AGTGGAGGGT GCAGAGTGTG TATGGGTAAA
 TTCCCAAGAA GAACACAATT

  Submitted Frequency for ss110890506 back to top
There is no frequency submission for ss110890506.


  dbSNP summary of Genotypes for ss110890506 back to top
No sufficient data to compute Hardy-weinberg probability for ss110890506.


  Submitted individual genotype for ss110890506 back to top
There is no individual genotype data for ss110890506.

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