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Submitted SNP(ss) Details: ss111936572           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_3686330_chr20_33228293
RefSNP(rs#)rs9574
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 17 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:111

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss111936572|allelePos=201|len=401|taxid=9606|alleles='C/G'|mol=Genomic
 GGGGTTTGAC TCAAATCATG GACTCCTTGG GGGCCTATTC TTCGGGCTAA CTCTTTGCAT
 GTTCTGCAGG GAGCCAAACA AGCCGCTCCT ACACTTCGCT GGTCCTGGGC GTCCTGGTGG
 GCAGTTTCAT CATTGCTGGT GTGGCTGTAG GCATCTTCCT GTGCACAGGT GGACGGCGAT
 GTTAATTACT CTCCAGCCCC
 S
 TCAGAAGGGG CTGGATTGAT GGAGGCTGGC AAGGGAAAGT TTCAGCTCAC TGTGAAGCCA
 GACTCCCCAA CTGAAACACC AGAAGGTTTG GAGTGACAGC TCCTTTCTTC TCCCACATCT
 GCCCACTGAA GATTTGAGGG AGGGGAGATG GAGAGGAGAG GTGGACAAAG TACTTGGTTT
 GCTAAGAACC TAAGAACGTG

  Submitted Frequency for ss111936572 back to top
There is no frequency submission for ss111936572.


  dbSNP summary of Genotypes for ss111936572 back to top
No sufficient data to compute Hardy-weinberg probability for ss111936572.


  Submitted individual genotype for ss111936572 back to top
There is no individual genotype data for ss111936572.

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