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Submitted SNP(ss) Details: ss114465914           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_2575614_chr13_28033294
RefSNP(rs#)rs1538925
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 18 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:126

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss114465914|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 GCTTGGGATG TGGGTGTCAA GGTTGTAGAT GCCTTGCACC AAACTTCTCT CATTCTTCTA
 ACTTATATTT TCTCGTTGAT GGCAGCCCCC TTACCACGAA TCAGGCTGGA TCCCCATGTG
 CAGGGAGACT AAAGGCTGTC TGACCCACCG CATGAGCCAT CCCCACCCTA CCACTGATGT
 GAGCACGTTG ATCTCTGGCC
 M
 GACATGTACA AAGGCGCTCC CTCTCTTCAG GGTGAGTTGT CCCCTAGCAA GATACTCTAA
 TTTCTCCCCC TTATTAAAAT ATATCCCCTT GTTACAATGT ATATAGAGAT CAAAATACAA
 CATGGTACCC TGTAAATATA CACAATTATT ATTTGCCAAT TTAAAAAATA TAAATTTCAA
 AAATAAAAAA GCCCAAACCA

  Submitted Frequency for ss114465914 back to top
There is no frequency submission for ss114465914.


  dbSNP summary of Genotypes for ss114465914 back to top
No sufficient data to compute Hardy-weinberg probability for ss114465914.


  Submitted individual genotype for ss114465914 back to top
There is no individual genotype data for ss114465914.

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