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Submitted SNP(ss) Details: ss115336378           
Submitter
Handle1000GENOMES
Submitter SNP IDNA19240_2008_12_16_1785095_chr8_43071141
RefSNP(rs#)rs11992567
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 19 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:145

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss115336378|allelePos=201|len=401|taxid=9606|alleles='C/T'|mol=Genomic
 CCAGCCTGGT GACAGAGTGA GACTCCTTCT CAAAAAAAGA AAAAAGAAAA AAAAGAAAGC
 TCTCCCTGCA TGTATCAGAG AAACTTCCAT GTATGCCTGG GGAGATGTAT ACACAGCTTG
 TCTCACTAAT TGTGGAAAAG TCAAACCAGT TGAAAATAGT GAACTGAGTT TTGTGCATCT
 GCATGGATAA ATCTCAGAAA
 Y
 GTAATGTTGA GCTTTTAAAA AAAACTGGTT GCAGGAGGAT AATACCAGCC CATCACTGTT
 TGTATAAAGC TTGAAAACAT ATGTATGATT TATGGGCACA TACTTGTGAA AATAAGCATG
 TATGAGAAGC GGAGTTTGGT AACCCATCCC TGTAGTCAGT CCCAGCTGCT TGGGAGGTGG
 AGGCAGGAGG ATCACTTGAG

  Submitted Frequency for ss115336378 back to top
There is no frequency submission for ss115336378.


  dbSNP summary of Genotypes for ss115336378 back to top
No sufficient data to compute Hardy-weinberg probability for ss115336378.


  Submitted individual genotype for ss115336378 back to top
There is no individual genotype data for ss115336378.

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