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Submitted SNP(ss) Details: ss1230699           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000804-342131
RefSNP(rs#)rs152882
Submitted Batch IDOVLP-000804-103
Submitted DateSep 02, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPSep 2 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC011340 SequenceAccession1:AC011340 SequenceVersion1:4 SequenceContigName1:Contig16 SequenceContigPosition1:6769 SequenceLocalName2:AC011422 SequenceAccession2:AC011422 SequenceVersion2:2 SequenceContigName2:Contig1 SequenceContigPosition2:118815 PolyBayesConfidence:97

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss1230699|allelePos=101|len=201|taxid=9606|alleles='C/T'|mol=Genomic
 TGGTCTACAT ATACTTGTTT GGAATGAGCA TTTTTTAATG TAATTAAAAT GTGTAATCTT
 AAAAGCTTAT TTCCTTACAG CTTGATTCCT CACTTTTTTC
 Y
 TTCTCTTTAT TCATGATAAT CAGAAACAGT GCATGCCTTT CTGGACCTCA AAAGGACACT
 GTGAGTACTT CTCTATTAGT ATACTTTGGG GTGTTGTTTT

  Submitted Frequency for ss1230699 back to top
There is no frequency submission for ss1230699.


  dbSNP summary of Genotypes for ss1230699 back to top
No sufficient data to compute Hardy-weinberg probability for ss1230699.


  Submitted individual genotype for ss1230699 back to top
There is no individual genotype data for ss1230699.

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