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Submitted SNP(ss) Details: ss12800368           
Submitter
HandleSC_SNP
Submitter SNP IDNT_007299.12_25154616
RefSNP(rs#)rs1396255
Submitted Batch IDCHR20_NA10470
Submitted DateNov 17, 2003
Publication Cited[1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP
[2] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 21 2003 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCHR20_NA10470
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence:20SNP45079-1563h06.p1cposition:461quality:35

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss12800368|allelePos=242|len=1294|taxid=9606|alleles='G/A'|mol=Genomic
 ATTTAGAGTC CCTCATCATC CACAAAGTCT TCAGTGTGTT TACTCTCTCA TTTGTTCCTA
 AAGTTTTTCT GGTTATAATT TATAATCTTT TTCTTATTCa gtaaagtttt tattttaaaa
 tagctttaga tttaaagaaa agttgcaaag acagcagttt ccataaccca caccattttc
 tgctattact agtatctcag tttagtgtgg tgtatttgtc acaactaata aatattgtta
 c
 R
 ctataattac ctaaagtttg tactttactc agctttcctt agtttttact ttatgtccct
 tttctgttcc agaattacat tcaggaaacc acattatctt tagtcctcat atctccttag
 gttcctctag actgataatt tctcaaagtt tccttggttt tgatgatgtt gacattattg
 aggagttttg cagagtgtcc gtcagttagg atttgtctaa tttcttatac ttagaccaag
 ttatggattt tggggatgga ggcAAcataa cattgaggat atttcagagg aacagaggag
 ccaactgaaa cagctcccaa tgctcaaagc tagaacaatt tgggcaacaa aatgcataac
 ataacattaa attgtaaccc aaaatataaa ataaatatcc acaagtccac agtaatacaa
 agaaatgatt gactgaatta gtaagcaaat gggaagaagg gagaatagac aaatcttcca
 tatggaagaa ttcaaataat tcatgcagat actctctctt caaggaggtg aagcataatt
 ccttactccc taactgtagg ctgcacatag tgacttcctt ctaaagagta aagtatgaaa
 agggaaaatg aaaaagtaac tGATATATTT GTTGCTACCt gtctcagtcc ttttggccta
 ctatgacaaa atttcttaga ctgggtaatt tataaacaaa attcattgct tatggttctg
 gaggctggga agtccaaggc caagctgtca gcaggttcaa tgtcttatga gggcttgctc
 tctgtttcaa agataacgcc ttctcactgt gtcctttgaa ggatgaaagg actccctcaa
 acctcttttg taagggcact gatcccgttt atgagggcag atccctcaag aaataatcac
 ctctcaaatg cacaacctct taataccttg gggattagat tttactgtat aaatattgga
 ggggcataaa cattcagacc atagcTCTGC CCATTCAGGT TCTACTGGTC TTAGGTGCTC
 TGGGTCACAC AAATATGTGT CCTGCAATTT GT

  Submitted Frequency for ss12800368 back to top
There is no frequency submission for ss12800368.


  dbSNP summary of Genotypes for ss12800368 back to top
No sufficient data to compute Hardy-weinberg probability for ss12800368.


  Submitted individual genotype for ss12800368 back to top
There is no individual genotype data for ss12800368.

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