Submitter | Handle | SC_SNP | Submitter SNP ID | NT_007299.12_25154616 | RefSNP(rs#) | rs1396255 | Submitted Batch ID | CHR20_NA10470 | Submitted Date | Nov 17, 2003 | Publication Cited | [1] SNPs detected by comparing chromosome and DNA specific sequences to NCBI Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Oct 21 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | NT_007299
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | CHR20_NA10470 | Ascertainment Samplesize | 2 | Population | N.D. |
| Allele | Observed Allele | G/A | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | c_g/a |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
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Comment | sequence:20SNP45079-1563h06.p1cposition:461quality:35 |
>gnl|dbSNP|ss12800368|allelePos=242|len=1294|taxid=9606|alleles='G/A'|mol=Genomic ATTTAGAGTC CCTCATCATC CACAAAGTCT TCAGTGTGTT TACTCTCTCA TTTGTTCCTA
AAGTTTTTCT GGTTATAATT TATAATCTTT TTCTTATTCa gtaaagtttt tattttaaaa
tagctttaga tttaaagaaa agttgcaaag acagcagttt ccataaccca caccattttc
tgctattact agtatctcag tttagtgtgg tgtatttgtc acaactaata aatattgtta
c
R
ctataattac ctaaagtttg tactttactc agctttcctt agtttttact ttatgtccct
tttctgttcc agaattacat tcaggaaacc acattatctt tagtcctcat atctccttag
gttcctctag actgataatt tctcaaagtt tccttggttt tgatgatgtt gacattattg
aggagttttg cagagtgtcc gtcagttagg atttgtctaa tttcttatac ttagaccaag
ttatggattt tggggatgga ggcAAcataa cattgaggat atttcagagg aacagaggag
ccaactgaaa cagctcccaa tgctcaaagc tagaacaatt tgggcaacaa aatgcataac
ataacattaa attgtaaccc aaaatataaa ataaatatcc acaagtccac agtaatacaa
agaaatgatt gactgaatta gtaagcaaat gggaagaagg gagaatagac aaatcttcca
tatggaagaa ttcaaataat tcatgcagat actctctctt caaggaggtg aagcataatt
ccttactccc taactgtagg ctgcacatag tgacttcctt ctaaagagta aagtatgaaa
agggaaaatg aaaaagtaac tGATATATTT GTTGCTACCt gtctcagtcc ttttggccta
ctatgacaaa atttcttaga ctgggtaatt tataaacaaa attcattgct tatggttctg
gaggctggga agtccaaggc caagctgtca gcaggttcaa tgtcttatga gggcttgctc
tctgtttcaa agataacgcc ttctcactgt gtcctttgaa ggatgaaagg actccctcaa
acctcttttg taagggcact gatcccgttt atgagggcag atccctcaag aaataatcac
ctctcaaatg cacaacctct taataccttg gggattagat tttactgtat aaatattgga
ggggcataaa cattcagacc atagcTCTGC CCATTCAGGT TCTACTGGTC TTAGGTGCTC
TGGGTCACAC AAATATGTGT CCTGCAATTT GT
There is no frequency submission for ss12800368.
No sufficient data to compute Hardy-weinberg probability for ss12800368.
There is no individual genotype data for ss12800368.
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