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Submitted SNP(ss) Details: ss16439576           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuAA-200402.chr1.NT_034471.3_287263
RefSNP(rs#)rs11240779
Submitted Batch IDCSHL-HuAA-200402
Submitted DateFeb 17, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 17 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUAA-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG Codec_g/a
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuAA505s19600402574928.F 290 57

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss16439576|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GGGGGTTTCA TTTGCTCCAC CTGCAGCGAG GTTAGCCCGT CTCAGGTTTG ACTCCTGACT
 TAATTTCTAA CAGGGGAAGC TGCTGTCCTG TAACTCCGGG GGAGGGGGTT TCATTTGCTC
 CACCTGCAGG GCGAATGGTG CTCTCACCTC ACACGTGACA CTTGGTCCTT TTTGCATTAT
 GGTGGTGACC ACTGATGACC
 R
 TATACCTGGC CGTGGAGTGA CTGGCTGTAC TGTCTTACAG GTCAGTGTGG GGCCAGAAAA
 AACTGGGCCA AGGGACACTA CACAGAAGGC ACCGAGCTGA TGGAGTCAGT GATGTACGTT
 GTCAGAAAGG AGGCTGAGAG CTGTAACTGC CTGCAGGGTT TCCAGCTGAC CCACTCCCTG
 GGTTGGGGGA CTGGGTCTGG

  Submitted Frequency for ss16439576 back to top
There is no frequency submission for ss16439576.


  dbSNP summary of Genotypes for ss16439576 back to top
No sufficient data to compute Hardy-weinberg probability for ss16439576.


  Submitted individual genotype for ss16439576 back to top
There is no individual genotype data for ss16439576.

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