NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss19206965           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuDD-200402.chr11.NT_033899.6_6038596
RefSNP(rs#)rs2245697
Submitted Batch IDCSHL-HuDD-200402
Submitted DateFeb 20, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 20 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUDD-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuDD21b19000128344146.R 578 37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss19206965|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 GAGGTCACAA AACCTCTTTA GTTTCAGAAT CACAGTGGCA TGAGGCAGGG TAGGGAAAAT
 TACATTTGGG AAGAAGGCAC CTAAAGCTAG GTGGCATGGA CAAAATACAA TTGAATAAGG
 ATCCCAGTAT CCTGAGTTAT TTTGAATTTA GTTCATCTAA AAGTGGGCTA AAGTCAAAAG
 AAGTTCAGTT CAACATGGTT
 R
 TGCTGGGCAT CAGCTGTGCT GTTCATCTGC GGGGCTGATA TTTAAGTGTT TAATGACTGG
 TATGGCCGGG GAACTGACCA GTTAATAAGG ATGAGTGGCA GAAACAATCG GTAGGGACAT
 GCCATTGCAC ATGGGTGCAA ATCAGCTCTA CGATGCAGAC AGCCAAGCGG TACACAGGTG
 CAGCCTGGCA GTCAGGAAAG

  Submitted Frequency for ss19206965 back to top
There is no frequency submission for ss19206965.


  dbSNP summary of Genotypes for ss19206965 back to top
No sufficient data to compute Hardy-weinberg probability for ss19206965.


  Submitted individual genotype for ss19206965 back to top
There is no individual genotype data for ss19206965.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement