NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss198941352           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr8-25303503
RefSNP(rs#)rs1000798
Submitted Batch IDBUSHMAN1
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleT/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss198941352|allelePos=201|len=401|taxid=9606|alleles='T/G'|mol=Genomic
 CAGAGGGATG CTTGTCCCAA GAAATTGTTT AAATCCATTT CTAAGTACCT ATTTCCTGAT
 ATTGCATTGA TGTCTATTTC CCTATGGCAA GGATTGTTTG CCAGATGTCT GACCGAAAAA
 AAAAAAAGGG CCCTAGGATT AATTATAATC ACTGAATAAG GCATTCCAGT GATACACAAA
 GGAACTCCCA TTTTCAGTGT
 K
 GTCCTGGCAT TGGGGTCAAA GGGAGTGATT GGTGCTGGTG GCATTTCCGG CTGTGAAGCA
 GGAGGAACAG GGGTGTTTGG TGTCTGACAC CTTCACGACC CCAGCCCCTC TCCTTTCCTT
 AACGAGCTCT TCAGACATGC AGTGCTTCAC TGTAAAGCCA GTGATGAGCT TGCCGCCCAG
 CTACAAGGAT AAACCTGTTC

  Submitted Frequency for ss198941352 back to top
There is no frequency submission for ss198941352.


  dbSNP summary of Genotypes for ss198941352 back to top
No sufficient data to compute Hardy-weinberg probability for ss198941352.


  Submitted individual genotype for ss198941352 back to top
There is no individual genotype data for ss198941352.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement