NCBI
 dbSNP
dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss201262010           
Submitter
HandleBUSHMAN
Submitter SNP IDBUSHMAN-chr15-97296235
RefSNP(rs#)rs2293117
Submitted Batch IDBUSHMAN1
Submitted DateFeb 16, 2010
Publication CitedN.D.
First entry to dbSNPFeb 16 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodBUSHMAN_METHODS
Ascertainment Samplesize10
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusbyFreq
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype Summarypopulation count: 2
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss201262010|allelePos=201|len=401|taxid=9606|alleles='T/C'|mol=Genomic
 CTCTGAGTCT TTCTCTTTTT GATTCCTCCC AGGTGCGATT GCTGGGTGTG GTGTCCCAAG
 GCCAGCCAAC ACTGGTCATC ATGGAACTGA TGACACGGGG CGATCTCAAA AGTTATCTCC
 GGTCTCTGAG GCCAGAAATG GAGGTCAGTT TTCATTTCCA CCGGTATTGC ATGTTGCCTG
 GCCTGCTCTC TTTTCCTTTA
 Y
 AATCTCCCTG CAAGGAAATG CTGTGTCTTT AAATCAGTTT ACTTTCCAGC ATCCAGTGTT
 TCTTACTGCA TGCTCAGTTG TAGGTCATTT ATGCAAAGGA TTTCCCCAAC TAGAGTCAGA
 CTCTGATCTT CGTGAGGGGA ACTTCCTGTT CCTTGGATCC CCTCTGCTAA GCCCCTCTGT
 GCCTTTGTTC CTGCATTCCC

  Submitted Frequency for ss201262010 back to top
There is no frequency submission for ss201262010.


  dbSNP summary of Genotypes for ss201262010 back to top
No sufficient data to compute Hardy-weinberg probability for ss201262010.


  Submitted individual genotype for ss201262010 back to top
There is no individual genotype data for ss201262010.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement