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Submitted SNP(ss) Details: ss20138712           
Submitter
HandleCSHL-HAPMAP
Submitter SNP IDCSHL-HuFF-200402.chr22.NT_011520.9_15051444
RefSNP(rs#)rs1053593
Submitted Batch IDCSHL-HuFF-200402
Submitted DateFeb 21, 2004
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPFeb 21 2004 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodCSHL-HUFF-200402
Ascertainment Samplesize2
PopulationN.D.
Allele
Observed AlleleG/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeUnknown
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position qualityHuFF101b19600401395399.R 249 52

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss20138712|allelePos=201|len=401|taxid=9606|alleles='G/T'|mol=Genomic
 GAAAAAGTCC AGCCCACAGT CTACTGATAC AGCTATGGAC CTGTTGAAAG CTATCACTTC
 CCCACTGGCA GCAGGCTCCA AGCCCTCCAA AAAGACTGGG GAGAAATCCT CTGGCTCTTC
 AAGCCATTCG GAGAGTAAAA AGGAGCACCA CAGGAAGAAA GTCAGTGGAA GCAGTGGGGA
 ACTACCCCTA GAGGATGGTG
 K
 CTCCCACAAA TCGAAAAAAA TGAAACCTCT CTATGTGAAC ACAGAGACAC TGACCCTTCG
 GGAGCCTGAT GGTTTAAAAA TGAAACTTAT TCTGTCACCA AAGGAGAAGG GAAGCAGCTC
 TGTTGATGAG GAGTCTTTTC AATATCCCTC CCAACAAGCG ACTGTGAAAA AATCCTCAAA
 GAAATCAGCT CGGGATGAGC

  Submitted Frequency for ss20138712 back to top
There is no frequency submission for ss20138712.


  dbSNP summary of Genotypes for ss20138712 back to top
No sufficient data to compute Hardy-weinberg probability for ss20138712.


  Submitted individual genotype for ss20138712 back to top
There is no individual genotype data for ss20138712.

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