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Submitted SNP(ss) Details: ss212158689           
Submitter
Handle1000GENOMES
Submitter SNP IDYRI.trio.3.2010_770046_chr8_3543676
RefSNP(rs#)rs2623587
Submitted Batch IDpilot_2_YRI_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPMar 29 2010 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:141

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss212158689|allelePos=201|len=401|taxid=9606|alleles='A/C'|mol=Genomic
 CTGCAGCAGT GTTAGAAATC ACTCTGGCCT ACTACCATTC AGATAAATCA CACGTTCCTA
 ATACAGCACT CGCGTCCCTA AAAGCAAGAC CTGATGATGA GAGGCATTTC TGGCAATCTA
 GTAACACGCC TGGTATTCCT TAATAATATT ATTGTGAAGC AAAATGTGTT TCTCACAGAT
 GAGTAAAGAG GATCATGTTC
 M
 TTACTGAAGA TTATCCATAT GCGGACTAAT AGAGTGAAAA TGTATCTGGT TATCTGGAAA
 ATTATGGCCT GATGAAAATG TCCGTGGGAA AATGATTTCT GAAATAAAGT TTCTGAGCTT
 GAAACTACAT AAGCATCATT TGCAATTGAT TGGATTAGGG GACATGTCAC AACTTCCATT
 CTGTGGTATC CTGTGTTCTA

  Submitted Frequency for ss212158689 back to top
There is no frequency submission for ss212158689.


  dbSNP summary of Genotypes for ss212158689 back to top
No sufficient data to compute Hardy-weinberg probability for ss212158689.


  Submitted individual genotype for ss212158689 back to top
There is no individual genotype data for ss212158689.

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