Submitted SNP(ss) Details: ss24422651

Submitted SNP(ss) Details: ss24422651

Submitter
Handle	PERLEGEN
Submitter SNP ID	afd0485583
RefSNP(rs#)	rs121
Submitted Batch ID	AFD_EUR_18-MAY-2004
Submitted Date	Aug 21, 2004
Publication Cited	N.D.
First entry to dbSNP	Aug 10 2004 12:00:00:000AM

Resource Links
GenBank Accession	NC_000007.8
Submitted Gene Name	N.D
Submitted Gene ID	N.D.
Submitted SNP Synonyms	N.D
Submitted linkout	N.D

Assay
Species	Homo sapiens
Molecular Type	Genomic
Method	AFD_CHIP_HYB
Ascertainment Samplesize	48
Population	AFD_EUR_PANEL

Allele
Observed Allele	A/G
Ancestral Allele	N.D.
Allele Origin	N/A
SNP Class	SNV
CpG Code	Unknown

Validation
Validation Status
HWE Goodness of Fit	not applicable

Variation
Frequency Submission	N.D.
Genotype Summary	population count: 3
Genotype Submission	N.D.
Haplotype	N.D.

Fasta sequence (Legend)

 TTCCAAATAG TTTGCAATTT CCCAGTAAAA TATATAAAGA AATTATGTCC TGAATTAACG
 TTAGAAATTT TTTAAGTGGG ATATCTAT
 TTCTGGTCTT TA
 R
 TAAAATAAAA TT
 ATTCAAATCC AAGTTATGCA TCTTTTTACA AATGGTACCC TCTGAAACAC CCTGATTTCA
 AAAATGTTAC ATGGTCAAAA GCAGGGCT

Submitted Frequency for ss24422651

There is no frequency submission for ss24422651.

dbSNP summary of Genotypes for ss24422651

Population ID -Class	Total Sample (2N)	Founder (2N)	Major Allele Freq.	Minor Allele Freq.	Genotype Freq.	HWE Goodness of Fit	Data Source
AFD_EUR_PANEL - NORTH AMERICA	46	46	A=0.67391306	G=0.32608697	A/G=0.56521738 A/A=0.39130434 G/G=0.04347826	Pr(chiSq=1.882,df=1) =0.200	Genotype Freq.
AFD_AFR_PANEL - NORTH AMERICA	46	46	G=0.82608694	A=0.17391305	G/G=0.65217394 A/G=0.34782609	Pr(chiSq=0.324,df=1) =0.584	Genotype Freq.
AFD_CHN_PANEL - NORTH AMERICA	48	48	G=0.79166669	A=0.20833333	G/G=0.62500000 A/G=0.33333334 A/A=0.04166667	Pr(chiSq=0.003,df=1) =1.000	Genotype Freq.

Submitted individual genotype for ss24422651

There is no individual genotype data for ss24422651.

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