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Submitted SNP(ss) Details: ss254722           
Submitter
HandleKWOK
Submitter SNP IDOVLP-000621-363855
RefSNP(rs#)rs193430
Submitted Batch IDOVLP-000621-20
Submitted DateJun 30, 2000
Publication Cited[1] A general approach to single-nucleotide polymorphism discovery
[2] Overlapping genomic sequences: a treasure trove of single-nucleotide polymorphisms
First entry to dbSNPJun 30 2000 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodOverlapSnpDetectionWithPolyBayes
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral Allele
Allele OriginN/A
SNP ClassSNV
CpG CodenonCpG
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
For parameters, see batch record.SNP-specific information (for explanation, see method record). SequenceLocalName1:AC034266 SequenceAccession1:AC034266 SequenceContigName1:Contig36 SequenceContigPosition1:11561 SequenceLocalName2:AC011090 SequenceAccession2:AC011090 SequenceContigName2:Contig4 SequenceContigPosition2:186 PolyBayesConfidence:80

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss254722|allelePos=1001|len=1342|taxid=9606|alleles='A/G'|mol=Genomic
 tgccacatat ctacaactat ctgatctttg acaaacctga gaaaaacaag caatggggaa
 aggattccct atttaataaa tggtgctggg aaaactggct agccatatgt agaaagctga
 aactggatcc cttccttaca ccttatacaa aaatcaattc aagatggatt aaagatttaa
 atgttagacc taaaaccata aaaaccctag aagaaaacct aggcattacc attcaggaca
 taggcgtggg caaggacttc atgtccaaaa caccaaaagc aatggcaaca aaagccaaaa
 ttgacaaatg ggatctaatt aaactaaaga gcttctgcac agcaaaagaa actaccatca
 gagtgaacag gcaacctaca acatgggaga aaattttcgc aacctactca tctgacaaag
 ggctaatatc cagaatctac aatgaactca aacaaattta caagaaaaaa acaaacaacc
 ccatcaaaaa gtgggcgaag gacatgaaca gacacttctc aaaagaagac atttatgcag
 ccaaaaaaca catgaagaaa tgctcatcat cactggccat cagagaaatg caaatcaaaa
 ccactatgag atatcatctc acaccagtta gaatggcaat cattaaaaag tcaggaaaca
 acaggtgctg gagaggatgt ggagaaatag gaacactttt acactgttgg tgggactgta
 aactagttca accattgtgg aagtcagtgt ggcgattcct cagggatcta gaactagaaa
 taccatttga cccagccatc ccattactgg gtatataccc aaaggactat aaatcatgct
 gctataaaga cacatgcaca cgtatgttta ttgcggcact attcacaata gcaaagactt
 ggaaccaacc caaatgtcca acaatgatag actggattaa gaaaatgtgg cacatataca
 ccatggaata ctatgcagcc ataaaaaatg atgagttcat
 R
 tcctttgtag ggacatggat gaaattggaa accatcattc tcagtaaact atcgcaagaa
 caaaaaacca aacaccgcat attctcactc ataggtggga attgaacaat gagatcacat
 ggacacagga aggggaatat cacactctgg ggactgtggt ggggtcgggg gaggggggag
 ggatagcatt gggagatata cctaatgcta gatgacacat tagtgggtgc agcgcaccag
 catggcacat gtatacatat gtaactaacc tgcacaatgt gcacatgtac cctaaaactt
 agagtataat aaaaaaaaaa aaaaaaaaaa aaaaGGTTTT A

  Submitted Frequency for ss254722 back to top
There is no frequency submission for ss254722.


  dbSNP summary of Genotypes for ss254722 back to top
No sufficient data to compute Hardy-weinberg probability for ss254722.


  Submitted individual genotype for ss254722 back to top
There is no individual genotype data for ss254722.

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