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Submitted SNP(ss) Details: ss2801739644           
Submitter
HandleGNOMAD
Submitter SNP IDrs471057
RefSNP(rs#)rs471057
Submitted Batch IDgenome_batch_chr3
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2801739644|allelePos=26|len=51|taxid=9606|alleles='A/G'|mol=Genomic
 AAAGTGTATT CATAATGTTA ATAAT
 R
 TTAAGATTTT ACCTTTTAAT AATAT

  Submitted Frequency for ss2801739644 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13676A=0.76791459
G=0.23208541
gnomad-FEMALEGNOMAD
ASJ298A=0.70134228
G=0.29865772
gnomad-ASJGNOMAD
AFR8700A=0.83206898
G=0.16793104
gnomad-AFRGNOMAD
NFE14802A=0.75206053
G=0.24793947
gnomad-NFEGNOMAD
FIN3418A=0.69280279
G=0.30719718
gnomad-FINGNOMAD
OTH954A=0.71278828
G=0.28721175
gnomad-OTHGNOMAD
AMR830A=0.72891569
G=0.27108434
gnomad-AMRGNOMAD
MALE16926A=0.77673399
G=0.22326598
gnomad-MALEGNOMAD
EAS1600A=0.88499999
G=0.11500000
gnomad-EASGNOMAD


  dbSNP summary of Genotypes for ss2801739644 back to top
No sufficient data to compute Hardy-weinberg probability for ss2801739644.


  Submitted individual genotype for ss2801739644 back to top
There is no individual genotype data for ss2801739644.

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