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Submitted SNP(ss) Details: ss2847619860           
Submitter
HandleGNOMAD
Submitter SNP IDrs1864449
RefSNP(rs#)rs1864449
Submitted Batch IDgenome_batch_chr6
Submitted DateMay 18, 2017
Publication CitedN.D.
First entry to dbSNPMay 18 2017 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodGNOMAD
Ascertainment Samplesize30992
PopulationN.D.
Allele
Observed AlleleT/C
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency Submissionpopulation count: 9
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss2847619860|allelePos=26|len=51|taxid=9606|alleles='T/C'|mol=Genomic
 GAGATATTAA CGTTTACACC TAACT
 Y
 AAGTTTGTCA TCTAAGACCT GAAGG

  Submitted Frequency for ss2847619860 back to top

Population ID
 -Class
Sample
(2n)
Major
Allele
Freq.
Minor
Allele
Freq.
Estimated
Heterozygosity
+/-std.err.
Genotype
Freq.
Submitted
Hetero-
zygosity
Submission
Batch
Submitter
FEMALE13826C=0.51960075
T=0.48039925
gnomad-FEMALEGNOMAD
FIN3484C=0.58008039
T=0.41991964
gnomad-FINGNOMAD
ASJ302C=0.50000000
T=0.50000000
gnomad-ASJGNOMAD
OTH974C=0.53901440
T=0.46098563
gnomad-OTHGNOMAD
NFE14986C=0.58107567
T=0.41892433
gnomad-NFEGNOMAD
AMR836T=0.65669858
C=0.34330145
gnomad-AMRGNOMAD
MALE17086T=0.50655508
C=0.49344492
gnomad-MALEGNOMAD
AFR8712T=0.58000457
C=0.41999540
gnomad-AFRGNOMAD
EAS1618T=0.83683562
C=0.16316441
gnomad-EASGNOMAD


  dbSNP summary of Genotypes for ss2847619860 back to top
No sufficient data to compute Hardy-weinberg probability for ss2847619860.


  Submitted individual genotype for ss2847619860 back to top
There is no individual genotype data for ss2847619860.

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