NCBI
dbSNP

dbVar ClinVar GaP PubMed Nucleotide Protein
Search small variations in dbSNP or large structural variations in dbVar
transparent GIF
Spacer gif
Have a question about dbSNP? Try searching the SNP FAQ Archive!

Spacer gif
Submitted SNP(ss) Details: ss489716401           
Submitter
Handle1000GENOMES
Submitter SNP ID20110521_exome_292294_chr1_3551792
RefSNP(rs#)rs2296034
Submitted Batch IDphase_1_exome_sites_20110521
Submitted DateFeb 10, 2012
Publication CitedN.D.
First entry to dbSNPFeb 10 2012 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodEXOME_CAPTURE
Ascertainment Samplesize2256
PopulationN.D.
Allele
Observed AlleleG/A
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss489716401|allelePos=201|len=401|taxid=9606|alleles='G/A'|mol=Genomic
 CCAAACTCCG TGATCATTTT CCAAGTCACG TGATTAAGGA TGCGCACCTG AGGAAGGAAA
 CCATGCACAG GTGAGGCAGG GCCCGGCCCG CTGGGCGGTC GGACTTCCTG AGTGCCCTGC
 ACTGGTTCCC ACCTTTCCAT CATAGCTCCC AACTGCCAGG AACTGACTGC TGGGGCTCCA
 GGCCACAGAC TTGATGCCCA
 R
 GGACCACTCG TAAGCGCTGT ACGTGGACAA CAACCGGCCA TCCAATGAGT ACAGCAGAAT
 CTTGTACTGC AGATGAGACA TTTCAGTTAA TAATGAATAC ACCCCCGTCG CCAGGAACAC
 ACCACAGACG CGGGTGCTGC AGAGTGACAT TGGTGCAGAT AGCACAAAGC TGGCAGGACT
 GTCCGCGTGG CCGTGGAAAA

  Submitted Frequency for ss489716401 back to top
There is no frequency submission for ss489716401.


  dbSNP summary of Genotypes for ss489716401 back to top
No sufficient data to compute Hardy-weinberg probability for ss489716401.


  Submitted individual genotype for ss489716401 back to top
There is no individual genotype data for ss489716401.

GENERAL: Contact Us | Homepage | Announcements |dbSNP Summary | Genome | FTP SERVER | Build History | Handle Request
DOCUMENTATION: FAQ | Searchable FAQ Archive | Overview | How to Submit | RefSNP Summary Info | Database Schema
SEARCH: Entrez SNP | Blast SNP | Batch Query | By Submitter |New Batches | Method | Population | Publication | Batch | Locus Info | Between Marker
NCBI: PubMed | Entrez | BLAST | OMIM | Taxonomy | Structure

Disclaimer     Privacy statement