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Submitted SNP(ss) Details: ss5500670862           
Submitter
HandleHUGCELL_USP
Submitter SNP ID20_18453214_C_T
RefSNP(rs#)clustering in process
Submitted Batch IDWGS_SNVs_INDELs
Submitted DateOct 19, 2021
Publication Cited[1] Whole-genome sequencing of 1,171 elderly admixed individuals from the largest Latin American metropolis (Sao Paulo, Brazil).
First entry to dbSNPOct 19 2021 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodWHOLEGENOMESEQUENCING
Ascertainment Samplesize2342
PopulationSABE_Brazil_WGS_1171
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5500670862|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 TCTTGCCTGG GGAATCTAGG CCACT
 Y
 TGACATAGAG AAGCAGCTTC AATGT

  Submitted Frequency for ss5500670862 back to top
There is no frequency submission for ss5500670862.


  dbSNP summary of Genotypes for ss5500670862 back to top
No sufficient data to compute Hardy-weinberg probability for ss5500670862.


  Submitted individual genotype for ss5500670862 back to top
There is no individual genotype data for ss5500670862.

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