| Submitter | | Handle | SNP500CANCER | | Submitter SNP ID | PARP1-01 | | RefSNP(rs#) | rs1136410 | | Submitted Batch ID | 08272003_update | | Submitted Date | Oct 28, 2003 | | Publication Cited | N.D. | | First entry to dbSNP | Sep 26 2002 12:00:00:000AM |
| | Resource Links | | GenBank Accession | NT_004525.13
| | Submitted Gene Name | N.D | | Submitted Gene ID | N.D. | | Submitted SNP Synonyms | N.D | | Submitted linkout | PARP1-01 |
| | Assay | | Species | Homo sapiens | Molecular
Type | Genomic | | Method | SEQUENCING | | Ascertainment Samplesize | 204 | | Population | P1 |
| | Allele | | Observed Allele | C/T | | Ancestral Allele | N.D. | | Allele Origin | N/A | | SNP Class | SNV | | CpG Code | c/t_g |
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| Comment | Platform: Sequencing Primer F: GTTCTCAAAGGACCACCAG, Temp: 46.4, GC Content:52.63, Product Size: 417 Primer R: TGCCATTCACTGTGTTGG, Temp: 47.4, GC Content:50
Platform: TaqMan Forward primer: ACCTCGATGTCCAGCAGGTT, Amount: 700 nM Reverse primer: AGGCCAAGGcGGAAATGCTTG, Amount: 700 nM Probe 1: CAGGCCAAGGtGGAAATGCTTGA, Amount: 100 nM Probe 2: TGGACCTTCTCTGCATGTAGGTT, Amount: 100 nM Annealing temperature: 60 C
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>gnl|dbSNP|ss5586195|allelePos=215|len=410|taxid=9606|alleles='C/T'|mol=Genomic CCCAGGCCAC AAGGCCTTGT TAACATTCCA GAAAGTCCTT ATGAGCTCTC AATATGTGCA
GCAGGTAACA GGCTGGCCCT GACCAGCAGG AGGGTTTGCC ATTCACTGTG TTGGACCTTC
TCTGCATGTA GGTTTTMTCT GCCACCTGGG TGAGTCTGTC TCATTCACCA TGATACCTAA
GTCGGGGGCT TTCTTTTGCT CCTCCAGGCC AAGG
Y
GGAAATGCTT GACAACCTGC TGGACATCGA GGTGGCCTAC AGTCTGCTCA GGGGAGGGTC
TGATGATAGC AGCAAGGATC CCATCGATGT CAACTATGAG AAGCTCAAAA CTGACATTAA
GGTAACAGGG TCAGGCCTTC CTCAAGCATC TTAACCTCTC ATCCTGAGAG CAGCGGTCCC
AAACTTCCAT GTGTG
No sufficient data to compute Hardy-weinberg probability for ss5586195.
There is no individual genotype data for ss5586195.
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