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Submitted SNP(ss) Details: ss5624194181           
Submitter
HandleSANFORD_IMAGENETICS
Submitter SNP IDrs734999
RefSNP(rs#)clustering in process
Submitted Batch IDGSA_variation
Submitted DateJan 27, 2022
Publication Cited[1] Establishing analytical validity of BeadChip array genotype data by comparison to whole-genome sequence and standard benchmark datasets
First entry to dbSNPJan 27 2022 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodCORIELL_262_GSA
Ascertainment Samplesize262
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Homozygote Detected
PCR Confirmed
In Expressed Sequence
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss5624194181|allelePos=26|len=51|taxid=9606|alleles='C/T'|mol=Genomic
 GAAATACCCG TGGGAAAGAA AAGCA
 Y
 AACAGAGAAC AGGAGACTTA TGTGA

  Submitted Frequency for ss5624194181 back to top
There is no frequency submission for ss5624194181.


  dbSNP summary of Genotypes for ss5624194181 back to top
No sufficient data to compute Hardy-weinberg probability for ss5624194181.


  Submitted individual genotype for ss5624194181 back to top
There is no individual genotype data for ss5624194181.

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