Submitter | Handle | WI_SSAHASNP | Submitter SNP ID | NT_007299.11_4118162 | RefSNP(rs#) | rs1028387 | Submitted Batch ID | 11-FEB-2003 | Submitted Date | Feb 12, 2003 | Publication Cited | [1] SNPs detected by comparing WIBR fosmid end reads to NCBI build 31 Genomic Reference Sequence using SsahaSNP [2] SSAHA: A Fast Search Method for Large DNA Databases | First entry to dbSNP | Feb 12 2003 12:00:00:000AM |
| Resource Links | GenBank Accession | 11
| Submitted Gene Name | N.D | Submitted Gene ID | N.D. | Submitted SNP Synonyms | N.D | Submitted linkout | N.D |
| Assay | Species | Homo sapiens | Molecular Type | Genomic | Method | WIBR_FOSMID_END_SNPS | Ascertainment Samplesize | 4 | Population | N.D. |
| Allele | Observed Allele | A/G | Ancestral Allele | N.D. | Allele Origin | N/A | SNP Class | SNV | CpG Code | nonCpG |
| | Variation | Frequency Submission | N.D. | Genotype Summary | N.D. | Genotype Submission | N.D. | Haplotype | N.D. |
|
Comment | sequence:G248P83392RA6.T0position:196quality:51sequence:G248P801937RF1.T0position:546quality:51sequence:G248P83399RB9.T0position:213quality:49 |
>gnl|dbSNP|ss6486587|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic CAgagggttg agggtgggag gagggagaag atcaggaaaa ataactaatg gatgctagac
ttaaaatccg ggtgatgaaa taatctgtaa aacaaacccc tgtgacacaa gtttagctgt
gtaacaaacc tacacttgta cccctgaact tcaaataaaa agtaaTAATA ATAAAAagag
atggggtttt actgtgcact
R
tgttgctcac tcaggctagt ctctaactcc tgggcttaag caatccttct cctttagcct
ccagagcagc tggaactata ggcATGTATT ATCATGATCC CATGGTAAAA TTTTGTGGAG
TGAGATTGGG AAGTAAGTTA ATTTGAGAAA AGAAACTTCA TAAAAGTGAC ATGTTTGGAA
AAAAATTATA AAAAAAGATA
There is no frequency submission for ss6486587.
No sufficient data to compute Hardy-weinberg probability for ss6486587.
There is no individual genotype data for ss6486587.
|