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Submitted SNP(ss) Details: ss78522937           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr1_69660875
RefSNP(rs#)rs1952142
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type
Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality89350326 -705 37

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78522937|allelePos=201|len=595|taxid=9606|alleles='C/G'|mol=Genomic
 TCTATCGCAT GAGTGCCATT ATAGCACTGC CCTTATCTAA TGAGAAGTGT CCCTGGAGGC
 AGACATGAAT CTCACTTGCT TTTGAGAGAT GTATCATTTG TCCATGGTTA CAGAAATAGT
 GGTGATCTGC TCCTGTGTAA TTTAACATCC TCCTCTTGCA ACATTCATAA GAATCATCTA
 AGGGAGTAAA ACCTGAGTAA
 S
 AGTATCACGG CATTTAACCA AAGGGATATA ATTCTAATAT TATTCTCCTC CTATTTTCCA
 CGCTGCTACA ACACTTTTCT GTAAATATGT TCTTTGCTTT TATACTGGTA TCATATTATT
 TTCAGGATAA AACTTAGGGT CTTCTATGTG GCTTAGAAAA TCTTTCTGAC CTGATCCTGC
 CTGCCCTATC TGCATCACCT TTTGCTGTAA CTACCCTGAC TCAAAACTCT GACATTGAAC
 CACAAGTTCC TTGAAGCCCC ACGCTCATTC TTGCCTCAGT GGCTTTGAGC TGGTTACTTC
 CTCTTCCTAA AATGCCTTGT GCCACCAATC TTCTTCTGGC TTATATACCA ACAGTTCTCA
 TCTCGTCAGA TAAGCATCCC CTAACTCCTG CATG

  Submitted Frequency for ss78522937 back to top
There is no frequency submission for ss78522937.


  dbSNP summary of Genotypes for ss78522937 back to top
No sufficient data to compute Hardy-weinberg probability for ss78522937.


  Submitted individual genotype for ss78522937 back to top
There is no individual genotype data for ss78522937.

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