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Submitted SNP(ss) Details: ss78628369           
Submitter
HandleHGSV
Submitter SNP IDCor12878_SNV_20070510.chr11_102000276
RefSNP(rs#)rs1962082
Submitted Batch IDNA12878-Fosmids-20070510
Submitted DateOct 17, 2007
Publication Cited[1] SSAHA: A Fast Search Method for Large DNA Databases
First entry to dbSNPOct 17 2007 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodNA12878-FOSMIDS
Ascertainment Samplesize3
PopulationN.D.
Allele
Observed AlleleC/T
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
sequence position quality89185065 -75 36

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss78628369|allelePos=201|len=450|taxid=9606|alleles='C/T'|mol=Genomic
 CCATTGCACA TGGGTGCAAA TCAGCTCTAC GATGCAGACA GCCAAGCGGT ACACAGGTGC
 AGCCTGGCAG TCAGGAAAGC AGCCCTGAGG CGGAGCTGGT GATCACAGAT GTGCTGTAAT
 GTTGGCAGAC TCTTGAAAGG GAGGCCTGTG TGCAAAAGCA TTTCCTCTAT ATATCTTTCA
 CTAATGTTGG AAATTCCATC
 Y
 GTAGACATCC ATTTCTTTAG GTTAAGGATG CCACCCTTCT TTTAAAAACA AAACACGCTT
 GGAAGCATAT ATATATATAT ATATATATAT ATATATATAT ATATATATAT ATGTAGAAAT
 CATTTTGAGT CAAGCAGTCT TTGTGAAATA TTTGAATATG GATCATTTCT ATCAGACCCT
 TTCCAGCAGT CATAGAGGAG AGATCTCAAA AGAGGAAAAT ACACAAAGTT TAAGTACATA
 AACGTTGTA

  Submitted Frequency for ss78628369 back to top
There is no frequency submission for ss78628369.


  dbSNP summary of Genotypes for ss78628369 back to top
No sufficient data to compute Hardy-weinberg probability for ss78628369.


  Submitted individual genotype for ss78628369 back to top
There is no individual genotype data for ss78628369.

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